2EI9
Crystal structure of R1Bm endonuclease domain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2ei9a_ | Alpha and beta proteins (a+b) | DNase I-like | DNase I-like | automated matches | automated matches | domestic silkworm (Bombyx mori ) [TaxId: 7091 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14529 | Endonuclease-reverse transcriptase (Exo_endo_phos_2) | Endonuclease-reverse transcriptase | This domain represents the endonuclease region of retrotransposons from a range of bacteria, archaea and eukaryotes. These are enzymes largely from class EC:2.7.7.49. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Non-LTR retrotransposon R1Bmks ORF2 protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005135 | Endonuclease/exonuclease/phosphatase | Domain | |
IPR000477 | Reverse transcriptase domain | Domain | |
IPR036691 | Endonuclease/exonuclease/phosphatase superfamily | Homologous Superfamily | |
IPR043502 | DNA/RNA polymerase superfamily | Homologous Superfamily |