2DFY
Crystal structure of a cyclized protein fusion of LMO4 LIM domains 1 and 2 with the LIM interacting domain of LDB1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth X] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8032679 | 3000068 | SCOP2B (2022-06-29) |
A [auth X] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8032684 | 3000068 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8032679 | 3000068 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8032684 | 3000068 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | PF00412 | e2dfyX2 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF00412 | ECOD (1.6) |
A [auth X] | PF17916 | e2dfyX5 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF17916 | ECOD (1.6) |
B [auth C] | PF00412 | e2dfyC2 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF00412 | ECOD (1.6) |
B [auth C] | PF17916 | e2dfyC5 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF17916 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth X] | 2.10.110.10 | Mainly Beta | Ribbon | Cysteine Rich Protein | Cysteine Rich Protein | CATH (4.3.0) |
B [auth C] | 2.10.110.10 | Mainly Beta | Ribbon | Cysteine Rich Protein | Cysteine Rich Protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth X], B [auth C] | PF00412 | LIM domain (LIM) | LIM domain | This family represents two copies of the LIM structural domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth X], B [auth C] | IPR001781 | Zinc finger, LIM-type | Domain |