2D4R | pdb_00002d4r

Crystal structure of TTHA0849 from Thermus thermophilus HB8

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d2d4rd_	Alpha and beta proteins (a+b)	TBP-like	Bet v1-like	oligoketide cyclase/dehydrase-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
C	d2d4rc_	Alpha and beta proteins (a+b)	TBP-like	Bet v1-like	oligoketide cyclase/dehydrase-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
B	d2d4rb_	Alpha and beta proteins (a+b)	TBP-like	Bet v1-like	oligoketide cyclase/dehydrase-like	automated matches	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
A	d2d4ra1	Alpha and beta proteins (a+b)	TBP-like	Bet v1-like	oligoketide cyclase/dehydrase-like	Hypothetical protein TTHA0849	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Bet v1-like	8039572	3000738	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Bet v1-like	8039572	3000738	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Bet v1-like	8039572	3000738	SCOP2B (2022-06-29)
A	SCOP2 Family	Oligoketide cyclase/dehydrase-like	8027193	4003820	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Bet v1-like	8039572	3000738	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Polyketide_cyc2	e2d4rD1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: Polyketide_cyc2	ECOD (v294.1)
C	Polyketide_cyc2	e2d4rC1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: Polyketide_cyc2	ECOD (v294.1)
B	Polyketide_cyc2	e2d4rB1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: Polyketide_cyc2	ECOD (v294.1)
A	Polyketide_cyc	e2d4rA1	A: a+b two layers	X: TBP-like	H: Bet v1-like	T: Bet v1-like	F: Polyketide_cyc	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.30.530.20	Alpha Beta	2-Layer Sandwich	Alpha-D-Glucose-1,6-Bisphosphate	Chain A, domain 4	CATH (4.3.0)
C	3.30.530.20	Alpha Beta	2-Layer Sandwich	Alpha-D-Glucose-1,6-Bisphosphate	Chain A, domain 4	CATH (4.3.0)
B	3.30.530.20	Alpha Beta	2-Layer Sandwich	Alpha-D-Glucose-1,6-Bisphosphate	Chain A, domain 4	CATH (4.3.0)
A	3.30.530.20	Alpha Beta	2-Layer Sandwich	Alpha-D-Glucose-1,6-Bisphosphate	Chain A, domain 4	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF03364	Polyketide cyclase / dehydrase and lipid transport (Polyketide_cyc)	Polyketide cyclase / dehydrase and lipid transport	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR023393	START-like domain superfamily	Homologous Superfamily
A, B, C, D	IPR005031	Coenzyme Q-binding protein COQ10, START domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.