2CO3 | pdb_00002co3

Salmonella enterica SafA pilin, head-to-tail swapped dimer of Ntd1 mutant


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyBacterial adhesin-like 8039117 3000723 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyBacterial adhesin-like 8039117 3000723 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BCBM_2e2co3B1 A: alpha bundlesX: Cloacin translocation domainH: beta-Prism IT: beta-Prism IF: CBM_2ECOD (develop294)
ACBM_2e2co3A1 A: alpha bundlesX: Cloacin translocation domainH: beta-Prism IT: beta-Prism IF: CBM_2ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.1570 Mainly Beta Sandwich Immunoglobulin-like Dr adhesinCATH (4.3.0)
A2.60.40.1570 Mainly Beta Sandwich Immunoglobulin-like Dr adhesinCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF09460Saf-pilin pilus formation protein (Saf-Nte_pilin)Saf-pilin pilus formation proteinThis domain consists of the adjacent Saf-Nte and Saf-pilin chains of the pilus-forming complex. Pilus assembly in Gram-negative bacteria involves a Donor-strand exchange mechanism between the C- and the N-termini of this domain. The C-terminal subuni ...This domain consists of the adjacent Saf-Nte and Saf-pilin chains of the pilus-forming complex. Pilus assembly in Gram-negative bacteria involves a Donor-strand exchange mechanism between the C- and the N-termini of this domain. The C-terminal subunit forms an incomplete Ig-fold which is then complemented by the 10-18 residue N-terminus of another, incoming, pilus subunit which is not involved in the Ig-fold. The N-terminus sequences contain a motif of alternating hydrophobic residues that occupy the P2 to P5 binding pockets in the groove of the first pilus subunit [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR037028Dr-adhesin superfamilyHomologous Superfamily
A, B
IPR018569Saf-pilin pilus formation proteinDomain
A, B
IPR008966Adhesion domain superfamilyHomologous Superfamily