Structure of D280A arginine deiminase with L-arginine forming a S-alkylthiouronium reaction intermediate
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d2abra1 | Alpha and beta proteins (a+b) | Pentein, beta/alpha-propeller | Pentein | Arginine deiminase | Arginine deiminase | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
| C | d2abrc_ | Alpha and beta proteins (a+b) | Pentein, beta/alpha-propeller | Pentein | Arginine deiminase | Arginine deiminase | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
| D | d2abrd_ | Alpha and beta proteins (a+b) | Pentein, beta/alpha-propeller | Pentein | Arginine deiminase | Arginine deiminase | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
| B | d2abrb_ | Alpha and beta proteins (a+b) | Pentein, beta/alpha-propeller | Pentein | Arginine deiminase | Arginine deiminase | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | Pentein | 8036801 | 3000640 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Pentein | 8036801 | 3000640 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Pentein | 8036801 | 3000640 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Pentein | 8036801 | 3000640 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | CBS | e2abrA1 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: CBS | ECOD (develop294) |
| C | CBS | e2abrC1 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: CBS | ECOD (develop294) |
| D | CBS | e2abrD1 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: CBS | ECOD (develop294) |
| B | CBS | e2abrB1 | A: alpha bundles | X: EGF-like | H: LDL receptor-like module | T: LDL receptor-like module | F: CBS | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.75.10.10 | Alpha Beta | 5-stranded Propeller | L-arginine/glycine Amidinotransferase | Chain A | CATH (4.3.0) |
| A | 1.10.3930.10 | Mainly Alpha | Orthogonal Bundle | Pentein | Arginine deiminase | CATH (4.3.0) |
| C | 3.75.10.10 | Alpha Beta | 5-stranded Propeller | L-arginine/glycine Amidinotransferase | Chain A | CATH (4.3.0) |
| C | 1.10.3930.10 | Mainly Alpha | Orthogonal Bundle | Pentein | Arginine deiminase | CATH (4.3.0) |
| D | 3.75.10.10 | Alpha Beta | 5-stranded Propeller | L-arginine/glycine Amidinotransferase | Chain A | CATH (4.3.0) |
| D | 1.10.3930.10 | Mainly Alpha | Orthogonal Bundle | Pentein | Arginine deiminase | CATH (4.3.0) |
| B | 3.75.10.10 | Alpha Beta | 5-stranded Propeller | L-arginine/glycine Amidinotransferase | Chain A | CATH (4.3.0) |
| B | 1.10.3930.10 | Mainly Alpha | Orthogonal Bundle | Pentein | Arginine deiminase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Arginine deiminase | - |
