2AAG | pdb_00002aag

Crystal Structures of the Wild-type, Mutant-P1A and Inactivated Malonate Semialdehyde Decarboxylase: A Structural Basis for the Decarboxylase and Hydratase Activities

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d2aagf_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	MSAD-like	Malonate semialdehyde decarboxylase, MSAD	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)
E	d2aage_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	MSAD-like	Malonate semialdehyde decarboxylase, MSAD	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)
D	d2aagd_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	MSAD-like	Malonate semialdehyde decarboxylase, MSAD	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)
C	d2aagc_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	MSAD-like	Malonate semialdehyde decarboxylase, MSAD	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)
B	d2aagb2	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	MSAD-like	Malonate semialdehyde decarboxylase, MSAD	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)
B	d2aagb3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)
A	d2aaga_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	MSAD-like	Malonate semialdehyde decarboxylase, MSAD	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	Tautomerase/MIF	8036809	3001770	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Tautomerase/MIF	8036809	3001770	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Tautomerase/MIF	8036809	3001770	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Tautomerase/MIF	8036809	3001770	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Tautomerase/MIF	8036809	3001770	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Tautomerase/MIF	8036809	3001770	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	IMS_C	e2aagF1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: IMS_C	ECOD (v294.1)
E	IMS_C	e2aagE1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: IMS_C	ECOD (v294.1)
D	IMS_C	e2aagD1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: IMS_C	ECOD (v294.1)
C	IMS_C	e2aagC1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: IMS_C	ECOD (v294.1)
B	IMS_C	e2aagB1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: IMS_C	ECOD (v294.1)
A	IMS_C	e2aagA1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: IMS_C	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
E	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
D	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
C	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
B	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
A	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR037479	Tautomerase, MSAD family	Family
A, B, C, D, E A, B, C, D, E, F	IPR014347	Tautomerase/MIF superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.