Annotations: 25QP

Cryo-EM Structure of PLPP3

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01569	PAP2 superfamily (PAP2)	PAP2 superfamily	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Phospholipid phosphatase 3	phosphoric ester hydrolase activity hydrolase activity, acting on ester bonds lipid phosphatase activity phosphatase activity hydrolase activity phosphatidate phosphatase activity catalytic activity protein binding binding delta-catenin binding cell adhesion molecule binding protein-containing complex binding integrin binding signaling receptor binding phosphoric ester hydrolase activity hydrolase activity, acting on ester bonds lipid phosphatase activity phosphatase activity hydrolase activity phosphatidate phosphatase activity catalytic activity protein binding binding delta-catenin binding cell adhesion molecule binding protein-containing complex binding integrin binding signaling receptor binding ceramide-1-phosphate phosphatase activity sphingosine-1-phosphate phosphatase activity	cell adhesion cell-cell adhesion cell-cell adhesion mediated by integrin cell adhesion mediated by integrin cellular process regulation of protein stability biological regulation regulation of biological quality protein stabilization phospholipid metabolic process organophosphate metabolic process metabolic process primary metabolic process phosphorus metabolic process cell adhesion cell-cell adhesion cell-cell adhesion mediated by integrin cell adhesion mediated by integrin cellular process regulation of protein stability biological regulation regulation of biological quality protein stabilization phospholipid metabolic process organophosphate metabolic process metabolic process primary metabolic process phosphorus metabolic process lipid metabolic process positive regulation of locomotion regulation of biological process regulation of cell motility regulation of cellular process endothelial cell migration positive regulation of biological process positive regulation of cell migration regulation of locomotion positive regulation of endothelial cell migration positive regulation of cell motility regulation of cell migration regulation of endothelial cell migration cell migration cell motility locomotion positive regulation of cellular process endothelial cell-matrix adhesion regulation of cell-substrate adhesion positive regulation of cell adhesion regulation of cell adhesion cell-substrate adhesion positive regulation of cell-matrix adhesion positive regulation of endothelial cell-matrix adhesion cell-matrix adhesion positive regulation of cell-substrate adhesion regulation of cell-matrix adhesion regulation of endothelial cell-matrix adhesion polyol metabolic process sphingolipid metabolic process alcohol metabolic process sphingosine metabolic process sphingoid metabolic process diol metabolic process small molecule metabolic process cellular response to stimulus integrin-mediated signaling pathway cell surface receptor signaling pathway response to stimulus signaling cell communication signal transduction localization transport retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum establishment of localization Golgi vesicle transport vesicle-mediated transport positive regulation of cell communication regulation of signaling positive regulation of signal transduction positive regulation of intracellular signal transduction regulation of signal transduction intracellular signal transduction positive regulation of response to stimulus regulation of intracellular signal transduction regulation of response to stimulus regulation of cell communication positive regulation of signaling sphingolipid catabolic process lipid catabolic process catabolic process regulation of homotypic cell-cell adhesion homotypic cell-cell adhesion positive regulation of cell-cell adhesion positive regulation of homotypic cell-cell adhesion regulation of cell-cell adhesion ceramide metabolic process positive regulation of DNA-templated transcription RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of transcription by RNA polymerase II regulation of macromolecule metabolic process positive regulation of transcription by RNA polymerase II nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression biosynthetic process positive regulation of RNA biosynthetic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process dephosphorylation phospholipid dephosphorylation phosphate-containing compound metabolic process lipid modification	cellular anatomical structure membrane cell periphery plasma membrane basal part of cell basal plasma membrane plasma membrane region basolateral plasma membrane membrane microdomain membrane raft membrane-bounded organelle intracellular anatomical structure organelle subcompartment intracellular membrane-bounded organelle cellular anatomical structure membrane cell periphery plasma membrane basal part of cell basal plasma membrane plasma membrane region basolateral plasma membrane membrane microdomain membrane raft membrane-bounded organelle intracellular anatomical structure organelle subcompartment intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum membrane cell-cell junction adherens junction anchoring junction cell junction endoplasmic reticulum exit site Golgi apparatus subcompartment Golgi apparatus trans-Golgi network Golgi membrane bounding membrane of organelle endoplasmic reticulum-Golgi intermediate compartment membrane endoplasmic reticulum-Golgi intermediate compartment

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR043216	Phosphatidic acid phosphatases-like	Family
A, B, C, D	IPR000326	Phosphatidic acid phosphatase type 2/haloperoxidase	Domain
A, B, C, D	IPR036938	Phosphatidic acid phosphatase type 2/haloperoxidase superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D	: O14495	coronary artery disease malignant mesothelioma medulloblastoma nephrosclerosis ovarian cancer pancreatic intraductal papillary-mucinous neoplasm adrenal cortex carcinoma pilocytic astrocytoma atrial fibrillation breast carcinoma Down syndrome glioblastoma large cell medulloblastoma malignant colon neoplasm malignant pancreatic neoplasm coronary artery disease malignant mesothelioma medulloblastoma nephrosclerosis ovarian cancer pancreatic intraductal papillary-mucinous neoplasm adrenal cortex carcinoma pilocytic astrocytoma atrial fibrillation breast carcinoma Down syndrome glioblastoma large cell medulloblastoma malignant colon neoplasm malignant pancreatic neoplasm myocardial infarction non-small cell lung carcinoma pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia astrocytic tumor psoriasis atypical teratoid rhabdoid tumor Coronary Arteriosclerosis ductal breast carcinoma in situ heart disease lung adenocarcinoma malignant ependymoma MALT lymphoma myopathy osteosarcoma pancreatic intraductal papillary-mucinous carcinoma Pick disease atopic eczema tuberculosis breast cancer Emery-Dreifuss muscular dystrophy invasive ductal breast carcinoma lung cancer

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

25QP | pdb_000025qp

Cryo-EM Structure of PLPP3

External Resource: Annotation

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation