23BB | pdb_000023bb

Caspase-4 p20/p10 and human GSDMD

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E [auth A]	Gasdermin-D	wide pore channel activity passive transmembrane transporter activity channel activity transporter activity transmembrane transporter activity ion binding binding anion binding phosphatidic acid binding phospholipid binding lipid binding small molecule binding phosphatidylglycerol binding cardiolipin binding wide pore channel activity passive transmembrane transporter activity channel activity transporter activity transmembrane transporter activity ion binding binding anion binding phosphatidic acid binding phospholipid binding lipid binding small molecule binding phosphatidylglycerol binding cardiolipin binding phosphatidylinositol-4,5-bisphosphate binding phosphatidylinositol bisphosphate binding phosphatidylinositol phosphate binding phosphatidylinositol-4-phosphate binding modified amino acid binding phosphatidylserine binding	regulation of defense response regulation of biological process response to stimulus regulation of response to external stimulus defense response biological regulation positive regulation of biological process response to external stimulus regulation of inflammatory response positive regulation of response to stimulus positive regulation of response to external stimulus positive regulation of inflammatory response regulation of response to stimulus regulation of response to stress response to stress regulation of defense response regulation of biological process response to stimulus regulation of response to external stimulus defense response biological regulation positive regulation of biological process response to external stimulus regulation of inflammatory response positive regulation of response to stimulus positive regulation of response to external stimulus positive regulation of inflammatory response regulation of response to stimulus regulation of response to stress response to stress positive regulation of defense response inflammatory response biological process involved in interspecies interaction between organisms immune response response to other organism defense response to symbiont response to biotic stimulus immune system process defense response to other organism innate immune response response to external biotic stimulus RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular component organization or biogenesis pore complex assembly defense response to bacterium response to bacterium multicellular organismal process regulation of cellular process interleukin-1 production regulation of interleukin-1 beta production positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of interleukin-1 beta production positive regulation of biosynthetic process regulation of cytokine production cytokine production regulation of multicellular organismal process positive regulation of interleukin-1 production positive regulation of macromolecule metabolic process positive regulation of cellular process regulation of biosynthetic process regulation of interleukin-1 production regulation of macromolecule metabolic process regulation of gene expression interleukin-1 beta production positive regulation of gene expression positive regulation of multicellular organismal process regulation of macromolecule biosynthetic process positive regulation of cytokine production regulation of metabolic process pyroptotic cell death pyroptotic inflammatory response cell death programmed cell death establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization intracellular protein localization defense response to Gram-negative bacterium protein complex oligomerization protein homooligomerization defense response to Gram-positive bacterium	cellular anatomical structure membrane membrane-bounded organelle mitochondrial membrane intracellular anatomical structure mitochondrion intracellular membrane-bounded organelle intracellular organelle organelle envelope organelle mitochondrial envelope cytoplasm organelle membrane cytosol cellular anatomical structure membrane membrane-bounded organelle mitochondrial membrane intracellular anatomical structure mitochondrion intracellular membrane-bounded organelle intracellular organelle organelle envelope organelle mitochondrial envelope cytoplasm organelle membrane cytosol cell periphery plasma membrane membrane-enclosed lumen intracellular vesicle ficolin-1-rich granule endomembrane system intracellular organelle lumen organelle lumen cytoplasmic vesicle ficolin-1-rich granule lumen secretory granule secretory vesicle vesicle nucleus nucleoplasm nuclear lumen tertiary granule lumen tertiary granule extracellular region canonical inflammasome complex protein-containing complex NLRP3 inflammasome complex vesicle lumen cytoplasmic vesicle lumen secretory granule lumen specific granule lumen specific granule
C, D	Caspase-4	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity binding lipid binding lipopolysaccharide binding carbohydrate derivative binding CARD domain binding protein binding protein domain specific binding	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process response to cytokine regulation of signal transduction positive regulation of response to cytokine stimulus cytokine-mediated signaling pathway cell communication positive regulation of tumor necrosis factor-mediated signaling pathway positive regulation of response to stimulus cellular response to tumor necrosis factor cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process response to cytokine regulation of signal transduction positive regulation of response to cytokine stimulus cytokine-mediated signaling pathway cell communication positive regulation of tumor necrosis factor-mediated signaling pathway positive regulation of response to stimulus cellular response to tumor necrosis factor tumor necrosis factor-mediated signaling pathway cellular response to cytokine stimulus signal transduction positive regulation of cellular process regulation of biological process regulation of signaling cell surface receptor signaling pathway regulation of tumor necrosis factor-mediated signaling pathway regulation of cytokine-mediated signaling pathway biological regulation response to peptide regulation of response to cytokine stimulus regulation of response to stimulus response to chemical regulation of cell communication cellular process response to tumor necrosis factor positive regulation of cytokine-mediated signaling pathway positive regulation of signaling primary metabolic process gene expression macromolecule biosynthetic process protein maturation protein autoprocessing biosynthetic process proteolysis protein processing metabolic process protein metabolic process macromolecule metabolic process response to interleukin-18 cellular response to interleukin-18 interleukin-18-mediated signaling pathway regulation of interleukin-18-mediated signaling pathway positive regulation of interleukin-18-mediated signaling pathway regulation of defense response regulation of response to external stimulus defense response response to external stimulus regulation of inflammatory response positive regulation of response to external stimulus positive regulation of inflammatory response regulation of response to stress response to stress positive regulation of defense response inflammatory response cell death intracellular signal transduction apoptotic signaling pathway apoptotic process intrinsic apoptotic signaling pathway programmed cell death biological process involved in interspecies interaction between organisms immune response response to other organism defense response to symbiont response to biotic stimulus immune system process defense response to other organism innate immune response response to external biotic stimulus neuron apoptotic process positive regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death positive regulation of apoptotic process positive regulation of neuron apoptotic process regulation of neuron apoptotic process defense response to bacterium response to bacterium cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular component organization or biogenesis non-canonical inflammasome complex assembly intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress cellular response to stress response to endoplasmic reticulum stress pyroptotic inflammatory response cellular response to nitrogen compound response to oxygen-containing compound response to nitrogen compound cellular response to amyloid-beta cellular response to oxygen-containing compound cellular response to chemical stimulus response to amyloid-beta defense response to Gram-positive bacterium	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol protein-containing complex organelle subcompartment membrane endomembrane system endoplasmic reticulum subcompartment membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol protein-containing complex organelle subcompartment membrane endomembrane system endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum organelle membrane endoplasmic reticulum membrane non-canonical inflammasome complex extracellular region canonical inflammasome complex NLRP1 inflammasome complex
A [auth B], B [auth E]	Caspase-4	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity binding lipid binding lipopolysaccharide binding carbohydrate derivative binding CARD domain binding protein binding protein domain specific binding	cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process response to cytokine regulation of signal transduction positive regulation of response to cytokine stimulus cytokine-mediated signaling pathway cell communication positive regulation of tumor necrosis factor-mediated signaling pathway positive regulation of response to stimulus cellular response to tumor necrosis factor cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction response to stimulus signaling positive regulation of biological process response to cytokine regulation of signal transduction positive regulation of response to cytokine stimulus cytokine-mediated signaling pathway cell communication positive regulation of tumor necrosis factor-mediated signaling pathway positive regulation of response to stimulus cellular response to tumor necrosis factor tumor necrosis factor-mediated signaling pathway cellular response to cytokine stimulus signal transduction positive regulation of cellular process regulation of biological process regulation of signaling cell surface receptor signaling pathway regulation of tumor necrosis factor-mediated signaling pathway regulation of cytokine-mediated signaling pathway biological regulation response to peptide regulation of response to cytokine stimulus regulation of response to stimulus response to chemical regulation of cell communication cellular process response to tumor necrosis factor positive regulation of cytokine-mediated signaling pathway positive regulation of signaling primary metabolic process gene expression macromolecule biosynthetic process protein maturation protein autoprocessing biosynthetic process proteolysis protein processing metabolic process protein metabolic process macromolecule metabolic process response to interleukin-18 cellular response to interleukin-18 interleukin-18-mediated signaling pathway regulation of interleukin-18-mediated signaling pathway positive regulation of interleukin-18-mediated signaling pathway regulation of defense response regulation of response to external stimulus defense response response to external stimulus regulation of inflammatory response positive regulation of response to external stimulus positive regulation of inflammatory response regulation of response to stress response to stress positive regulation of defense response inflammatory response cell death intracellular signal transduction apoptotic signaling pathway apoptotic process intrinsic apoptotic signaling pathway programmed cell death biological process involved in interspecies interaction between organisms immune response response to other organism defense response to symbiont response to biotic stimulus immune system process defense response to other organism innate immune response response to external biotic stimulus neuron apoptotic process positive regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death positive regulation of apoptotic process positive regulation of neuron apoptotic process regulation of neuron apoptotic process defense response to bacterium response to bacterium cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular component organization or biogenesis non-canonical inflammasome complex assembly intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress cellular response to stress response to endoplasmic reticulum stress pyroptotic inflammatory response cellular response to nitrogen compound response to oxygen-containing compound response to nitrogen compound cellular response to amyloid-beta cellular response to oxygen-containing compound cellular response to chemical stimulus response to amyloid-beta defense response to Gram-positive bacterium	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol protein-containing complex organelle subcompartment membrane endomembrane system endoplasmic reticulum subcompartment membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol protein-containing complex organelle subcompartment membrane endomembrane system endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum organelle membrane endoplasmic reticulum membrane non-canonical inflammasome complex extracellular region canonical inflammasome complex NLRP1 inflammasome complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E [auth A]	IPR040460	Gasdermin, pore forming domain	Domain
E [auth A]	IPR007677	Gasdermin	Family
E [auth A]	IPR041263	Gasdermin, PUB domain	Domain
C, D	IPR001309	Peptidase C14, p20 domain	Domain
C, D	IPR011600	Peptidase C14, caspase domain	Domain
C, D	IPR016129	Peptidase family C14A, His active site	Active Site
C, D	IPR015917	Peptidase C14A, caspase catalytic domain	Domain
C, D	IPR011029	Death-like domain superfamily	Homologous Superfamily
C, D	IPR029030	Caspase-like domain superfamily	Homologous Superfamily
C, D	IPR033139	Peptidase family C14A, cysteine active site	Active Site
C, D	IPR002138	Peptidase C14, caspase non-catalytic subunit p10	Domain
C, D	IPR001315	CARD domain	Domain
C, D	IPR002398	Peptidase C14 family	Family
A [auth B], B [auth E]	IPR001309	Peptidase C14, p20 domain	Domain
A [auth B], B [auth E]	IPR011600	Peptidase C14, caspase domain	Domain
A [auth B], B [auth E]	IPR016129	Peptidase family C14A, His active site	Active Site
A [auth B], B [auth E]	IPR015917	Peptidase C14A, caspase catalytic domain	Domain
A [auth B], B [auth E]	IPR011029	Death-like domain superfamily	Homologous Superfamily
A [auth B], B [auth E]	IPR029030	Caspase-like domain superfamily	Homologous Superfamily
A [auth B], B [auth E]	IPR033139	Peptidase family C14A, cysteine active site	Active Site
A [auth B], B [auth E]	IPR002138	Peptidase C14, caspase non-catalytic subunit p10	Domain
A [auth B], B [auth E]	IPR001315	CARD domain	Domain
A [auth B], B [auth E]	IPR002398	Peptidase C14 family	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
E [auth A]	: P57764	Alcoholism ovarian cancer tuberculosis cutaneous lupus erythematosus pituitary cancer osteosarcoma psoriasis
C, D	: P49662	Liver Cirrhosis, Experimental schizophrenia cystic fibrosis malignant mesothelioma ovarian cancer plasma cell myeloma subependymal giant cell astrocytoma glioblastoma lung cancer non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis ulcerative colitis hepatocellular carcinoma lung carcinoma Liver Cirrhosis, Experimental schizophrenia cystic fibrosis malignant mesothelioma ovarian cancer plasma cell myeloma subependymal giant cell astrocytoma glioblastoma lung cancer non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis ulcerative colitis hepatocellular carcinoma lung carcinoma osteosarcoma pituitary cancer
A [auth B], B [auth E]	: P49662	Liver Cirrhosis, Experimental schizophrenia cystic fibrosis malignant mesothelioma ovarian cancer plasma cell myeloma subependymal giant cell astrocytoma glioblastoma lung cancer non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis ulcerative colitis hepatocellular carcinoma lung carcinoma Liver Cirrhosis, Experimental schizophrenia cystic fibrosis malignant mesothelioma ovarian cancer plasma cell myeloma subependymal giant cell astrocytoma glioblastoma lung cancer non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis ulcerative colitis hepatocellular carcinoma lung carcinoma osteosarcoma pituitary cancer

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.