Cryo-EM structure of the TNF-alpha-Ozoralizumab (OZR)-HSA complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| E | SCOP2B Superfamily | Serum albumin-like | 8033045 | 3001552 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Serum albumin-like | 8033044 | 3001552 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Serum albumin-like | 8033047 | 3001552 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | TNF-like | 8041219 | 3000061 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | TNF-like | 8041219 | 3000061 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | TNF-like | 8041219 | 3000061 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| E | ClpB_D2-small | e21tvE1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: ClpB_D2-small | ECOD (v295.2) |
| D | ClpB_D2-small | e21tvD1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: ClpB_D2-small | ECOD (v295.2) |
| C | Pkinase | e21tvC1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Pkinase | ECOD (v295.2) |
| B | ClpB_D2-small | e21tvB1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: ClpB_D2-small | ECOD (v295.2) |
| A | Pkinase | e21tvA1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Pkinase | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00273 | Serum albumin family (Serum_albumin) | Serum albumin family | Domain | ||
| PF00229 | TNF(Tumour Necrosis Factor) family (TNF) | TNF(Tumour Necrosis Factor) family | Domain | ||
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR020857 | Serum albumin, conserved site | Conserved Site | |
| IPR000264 | ALB/AFP/VDB | Family | |
| IPR014760 | Serum albumin, N-terminal | Domain | |
| IPR020858 | Serum albumin-like | Homologous Superfamily | |
| IPR021177 | Serum albumin/Alpha-fetoprotein/Afamin | Family | |
| IPR008983 | Tumour necrosis factor-like domain superfamily | Homologous Superfamily | |
| IPR021184 | Tumour necrosis factor, conserved site | Conserved Site | |
| IPR006053 | Tumour necrosis factor | Family | |
| IPR002959 | Tumour necrosis factor alpha | Family | |
| IPR006052 | Tumour necrosis factor domain | Domain |