1ZO8 | pdb_00001zo8

X-ray Structure of the haloalcohol dehalogenase HheC of Agrobacterium radiobacter AD1 in complex with (S)-para-nitrostyrene oxide, with a water molecule in the halide-binding site

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
P	d1zo8p_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
O	d1zo8o_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
N	d1zo8n_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
M	d1zo8m_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
L	d1zo8l_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
K	d1zo8k_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
J	d1zo8j_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
I	d1zo8i_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
H	d1zo8h_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
G	d1zo8g_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
F	d1zo8f_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
E	d1zo8e_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
D	d1zo8d_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
C	d1zo8c_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
B	d1zo8b_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
A	d1zo8a_	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Tyrosine-dependent oxidoreductases	Halohydrin dehalogenase HheC	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
P	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	SDR-like	8057203	3000038	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
P	KR	e1zo8P1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
O	KR	e1zo8O1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
N	KR	e1zo8N1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
M	KR	e1zo8M1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
L	KR	e1zo8L1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
K	KR	e1zo8K1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
J	KR	e1zo8J1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
I	KR	e1zo8I1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
H	KR	e1zo8H1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
G	KR	e1zo8G1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
F	KR	e1zo8F1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
E	KR	e1zo8E1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
D	KR	e1zo8D1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
C	KR	e1zo8C1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
B	KR	e1zo8B1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)
A	KR	e1zo8A1	A: alpha bundles	X: HTH	H: HTH	T: winged helix domain	F: KR	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
P	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
O	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
N	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
M	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
L	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
K	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
J	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
I	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
H	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
G	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
F	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
E	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
D	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
C	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
B	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
A	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR002347	Short-chain dehydrogenase/reductase SDR	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR050259	Short-chain dehydrogenases/reductases	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.