1ZHS

Crystal structure of MVL bound to Man3GlcNAc2

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1zhsa1	Alpha and beta proteins (a+b)	Dodecin subunit-like	Oligosaccharide binding protein	Oligomannose binding protein MVL-like	Mannan-binding lectin MVL	(Microcystis viridis ) [TaxId: 44822 ],	SCOPe (2.08)
B	d1zhsb1	Alpha and beta proteins (a+b)	Dodecin subunit-like	Oligosaccharide binding protein	Oligomannose binding protein MVL-like	Mannan-binding lectin MVL	(Microcystis viridis ) [TaxId: 44822 ],	SCOPe (2.08)
C	d1zhsc1	Alpha and beta proteins (a+b)	Dodecin subunit-like	Oligosaccharide binding protein	Oligomannose binding protein MVL-like	Mannan-binding lectin MVL	(Microcystis viridis ) [TaxId: 44822 ],	SCOPe (2.08)
D	d1zhsd1	Alpha and beta proteins (a+b)	Dodecin subunit-like	Oligosaccharide binding protein	Oligomannose binding protein MVL-like	Mannan-binding lectin MVL	(Microcystis viridis ) [TaxId: 44822 ],	SCOPe (2.08)
E	d1zhse1	Alpha and beta proteins (a+b)	Dodecin subunit-like	Oligosaccharide binding protein	Oligomannose binding protein MVL-like	Mannan-binding lectin MVL	(Microcystis viridis ) [TaxId: 44822 ],	SCOPe (2.08)
F	d1zhsf1	Alpha and beta proteins (a+b)	Dodecin subunit-like	Oligosaccharide binding protein	Oligomannose binding protein MVL-like	Mannan-binding lectin MVL	(Microcystis viridis ) [TaxId: 44822 ],	SCOPe (2.08)
G	d1zhsg1	Alpha and beta proteins (a+b)	Dodecin subunit-like	Oligosaccharide binding protein	Oligomannose binding protein MVL-like	Mannan-binding lectin MVL	(Microcystis viridis ) [TaxId: 44822 ],	SCOPe (2.08)
H	d1zhsh1	Alpha and beta proteins (a+b)	Dodecin subunit-like	Oligosaccharide binding protein	Oligomannose binding protein MVL-like	Mannan-binding lectin MVL	(Microcystis viridis ) [TaxId: 44822 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF12151	e1zhsA2	A: a+b two layers	X: Dodecin subunit-like	H: mannan-binding lectin MVL (From Topology)	T: mannan-binding lectin MVL	F: PF12151	ECOD (1.6)
B	PF12151	e1zhsB2	A: a+b two layers	X: Dodecin subunit-like	H: mannan-binding lectin MVL (From Topology)	T: mannan-binding lectin MVL	F: PF12151	ECOD (1.6)
C	PF12151	e1zhsC2	A: a+b two layers	X: Dodecin subunit-like	H: mannan-binding lectin MVL (From Topology)	T: mannan-binding lectin MVL	F: PF12151	ECOD (1.6)
D	PF12151	e1zhsD2	A: a+b two layers	X: Dodecin subunit-like	H: mannan-binding lectin MVL (From Topology)	T: mannan-binding lectin MVL	F: PF12151	ECOD (1.6)
E	PF12151	e1zhsE2	A: a+b two layers	X: Dodecin subunit-like	H: mannan-binding lectin MVL (From Topology)	T: mannan-binding lectin MVL	F: PF12151	ECOD (1.6)
F	PF12151	e1zhsF2	A: a+b two layers	X: Dodecin subunit-like	H: mannan-binding lectin MVL (From Topology)	T: mannan-binding lectin MVL	F: PF12151	ECOD (1.6)
G	PF12151	e1zhsG2	A: a+b two layers	X: Dodecin subunit-like	H: mannan-binding lectin MVL (From Topology)	T: mannan-binding lectin MVL	F: PF12151	ECOD (1.6)
H	PF12151	e1zhsH2	A: a+b two layers	X: Dodecin subunit-like	H: mannan-binding lectin MVL (From Topology)	T: mannan-binding lectin MVL	F: PF12151	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.1490.230	Alpha Beta	2-Layer Sandwich	Dna Ligase	domain 1	CATH (4.3.0)
B	3.30.1490.230	Alpha Beta	2-Layer Sandwich	Dna Ligase	domain 1	CATH (4.3.0)
C	3.30.1490.230	Alpha Beta	2-Layer Sandwich	Dna Ligase	domain 1	CATH (4.3.0)
D	3.30.1490.230	Alpha Beta	2-Layer Sandwich	Dna Ligase	domain 1	CATH (4.3.0)
E	3.30.1490.230	Alpha Beta	2-Layer Sandwich	Dna Ligase	domain 1	CATH (4.3.0)
F	3.30.1490.230	Alpha Beta	2-Layer Sandwich	Dna Ligase	domain 1	CATH (4.3.0)
G	3.30.1490.230	Alpha Beta	2-Layer Sandwich	Dna Ligase	domain 1	CATH (4.3.0)
H	3.30.1490.230	Alpha Beta	2-Layer Sandwich	Dna Ligase	domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF12151	Mannan-binding protein (MVL)	Mannan-binding protein	This domain family is found in bacteria, and is approximately 40 amino acids in length, There is a single completely conserved residue G that may be functionally important. The domain occurs in two types of proteins. In mannan binding proteins [1], i ...	This domain family is found in bacteria, and is approximately 40 amino acids in length, There is a single completely conserved residue G that may be functionally important. The domain occurs in two types of proteins. In mannan binding proteins [1], it forms a homodimeric molecule which complexes into a homo-octamer. In thiamidases it occurs without repeats but in the presence of other domains. MVL is distinct amongst other oligomannoside binding proteins in that it exhibits specificity for certain tetrasaccharides. Each molecule of MVL has four distinct carbohydrate binding sites.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	mannan-binding lectin	binding carbohydrate binding hydrolase activity, acting on glycosyl bonds hydrolase activity catalytic activity	regulation of defense response regulation of response to biotic stimulus regulation of biological process biological process involved in interspecies interaction between organisms response to stimulus regulation of response to external stimulus response to other organism defense response biological regulation defense response to symbiont response to external stimulus response to biotic stimulus regulation of defense response to virus defense response to virus regulation of response to stimulus regulation of defense response regulation of response to biotic stimulus regulation of biological process biological process involved in interspecies interaction between organisms response to stimulus regulation of response to external stimulus response to other organism defense response biological regulation defense response to symbiont response to external stimulus response to biotic stimulus regulation of defense response to virus defense response to virus regulation of response to stimulus defense response to other organism response to stress regulation of response to stress response to external biotic stimulus response to virus metabolic process	intracellular anatomical structure cytoplasm cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR021992	Mannan-binding protein	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.