1YWM | pdb_00001ywm

Crystal structure of the N-terminal domain of group B Streptococcus alpha C protein

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AAlphaC_Ne1ywmA1 A: beta sandwichesX: C protein alpha-antigen beta-sandwich domain (From Topology)H: C protein alpha-antigen beta-sandwich domain (From Topology)T: C protein alpha-antigen beta-sandwich domainF: AlphaC_NECOD (1.6)
AAlphaC_Ce1ywmA2 A: alpha bundlesX: immunoglobulin/albumin-binding domain-likeH: C protein alpha-antigen helical bundle domain (From Topology)T: C protein alpha-antigen helical bundle domainF: AlphaC_CECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.500.10 Mainly Beta Sandwich Surface Active Protein fold Surface Active Protein domainCATH (4.2.0)
A1.20.1270.150 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak Chain:ACATH (4.2.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C protein alpha-antigen- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR038544ACP, N-terminal domain superfamilyHomologous Superfamily
IPR019950M protein-type anchor domainDomain
IPR005877YSIRK Gram-positive signal peptideDomain
IPR038335ACP, C-terminal domain superfamilyHomologous Superfamily
IPR012706Rib/alpha/Esp surface antigen repeatRepeat
IPR035327AlphaC, C-terminalDomain
IPR014933Alpha C protein, N-terminalDomain
IPR019931LPXTG cell wall anchor domainDomain