Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1yara_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Bd1yarb_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Dd1yard_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Ed1yare_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Fd1yarf_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Gd1yarg_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Cd1yarc_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Hd1yarh_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Jd1yarj_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Kd1yark_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Ld1yarl_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Md1yarm_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Nd1yarn_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Id1yari_ Alpha and beta proteins (a+b) Ntn hydrolase-like N-terminal nucleophile aminohydrolases (Ntn hydrolases) Proteasome subunits automated matches (Thermoplasma acidophilum ) [TaxId: 2303 ], SCOPe (2.08)
Od1yaro_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Pd1yarp_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Qd1yarq_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Rd1yarr_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Sd1yars_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Td1yart_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)
Ud1yaru_ All alpha proteins Four-helical up-and-down bundle Proteasome activator Proteasome activator automated matches (Trypanosoma brucei ) [TaxId: 5691 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyProteasome subunits8021868 4002254 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyClass II glutamine amidotransferases8034248 3000131 SCOP2B (2022-06-29)
HSCOP2 FamilyProteasome subunits8021874 4002254 SCOP2 (2022-06-29)
HSCOP2 SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2 (2022-06-29)
JSCOP2B SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyClass II glutamine amidotransferases8034254 3000131 SCOP2B (2022-06-29)
OSCOP2 FamilyProteasome activator8020095 4000831 SCOP2 (2022-06-29)
OSCOP2 SuperfamilyProteasome activator-like8032475 3001611 SCOP2 (2022-06-29)
PSCOP2B SuperfamilyProteasome activator-like8032475 3001611 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyProteasome activator-like8032475 3001611 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyProteasome activator-like8032475 3001611 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyProteasome activator-like8032475 3001611 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyProteasome activator-like8032475 3001611 SCOP2B (2022-06-29)
USCOP2B SuperfamilyProteasome activator-like8032475 3001611 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AProteasomee1yarA1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
BProteasomee1yarB1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
DProteasomee1yarD1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
EProteasomee1yarE1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
FProteasomee1yarF1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
GProteasomee1yarG1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
CProteasomee1yarC1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
HProteasomee1yarH1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
JProteasomee1yarJ1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
KProteasomee1yarK1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
LProteasomee1yarL1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
MProteasomee1yarM1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
NProteasomee1yarN1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
IProteasomee1yarI1 A: a+b four layersX: Ntn/PP2CH: NtnT: Proteasome subunitsF: ProteasomeECOD (1.6)
OPA28_beta_1e1yarO1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
PPA28_beta_1e1yarP1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
QPA28_beta_1e1yarQ1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
RPA28_beta_1e1yarR1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
SPA28_beta_1e1yarS1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
TPA28_beta_1e1yarT1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)
UPA28_beta_1e1yarU1 A: alpha bundlesX: Four-helical up-and-down bundleH: Proteasome activator reg(alpha) (From Topology)T: Proteasome activator reg(alpha)F: PA28_beta_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
B3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
D3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
E3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
F3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
G3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
C3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
H3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
J3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
K3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
L3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
M3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
N3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
I3.60.20.10 Alpha Beta 4-Layer Sandwich Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Aminohydrolase, N-terminal nucleophile (Ntn) domainCATH (4.3.0)
O1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
P1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
Q1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
R1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
S1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
T1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)
U1.20.120.180 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Proteasome activator pa28, C-terminal domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
A, B, C, D, E
PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
H, I, J, K, L
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
O, P, Q, R, S
PF02252Proteasome activator pa28 beta subunit (PA28_beta)Proteasome activator pa28 beta subunit- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Proteasome alpha subunit
H, I, J, K, L
Proteasome beta subunit
O, P, Q, R, S
proteasome activator protein PA26-

InterPro: Protein Family Classification InterPro Database Homepage