1XB9
The structure and function of Xenopus NO38-core, a histone chaperone in the nucleolus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8043849 | 3002011 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8043849 | 3002011 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8043849 | 3002011 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8043849 | 3002011 | SCOP2B (2021-05-27) |
E | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8043849 | 3002011 | SCOP2B (2021-05-27) |
F | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8043849 | 3002011 | SCOP2B (2021-05-27) |
G | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8043849 | 3002011 | SCOP2B (2021-05-27) |
H | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8043849 | 3002011 | SCOP2B (2021-05-27) |
I | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8043849 | 3002011 | SCOP2B (2021-05-27) |
J | SCOP2B Superfamily | Nucleoplasmin-like core domain | 8043849 | 3002011 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF03066 | e1xb9A1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF03066 | ECOD (1.6) |
B | PF03066 | e1xb9B1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF03066 | ECOD (1.6) |
C | PF03066 | e1xb9C1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF03066 | ECOD (1.6) |
D | PF03066 | e1xb9D1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF03066 | ECOD (1.6) |
E | PF03066 | e1xb9E1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF03066 | ECOD (1.6) |
F | PF03066 | e1xb9F1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF03066 | ECOD (1.6) |
G | PF03066 | e1xb9G1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF03066 | ECOD (1.6) |
H | PF03066 | e1xb9H1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF03066 | ECOD (1.6) |
I | PF03066 | e1xb9I1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF03066 | ECOD (1.6) |
J | PF03066 | e1xb9J1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF03066 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
B | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
C | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
D | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
E | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
F | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
G | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
H | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
I | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
J | 2.60.120.340 | Mainly Beta | Sandwich | Jelly Rolls | Nucleoplasmin core domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03066 | Nucleoplasmin/nucleophosmin domain (Nucleoplasmin) | Nucleoplasmin/nucleophosmin domain | Nucleoplasmins are also known as chromatin decondensation proteins. They bind to core histones and transfer DNA to them in a reaction that requires ATP. This is thought to play a role in the assembly of regular nucleosomal arrays. | Domain |