1WS8 | pdb_00001ws8

Crystal Structure of Mavicyanin from Cucurbita pepo medullosa (Zucchini)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1ws8a_	All beta proteins	Cupredoxin-like	Cupredoxins	Plastocyanin/azurin-like	Mavicyanin	(Cucurbita pepo ) [TaxId: 3663 ],	SCOPe (2.08)
C	d1ws8c_	All beta proteins	Cupredoxin-like	Cupredoxins	Plastocyanin/azurin-like	Mavicyanin	(Cucurbita pepo ) [TaxId: 3663 ],	SCOPe (2.08)
D	d1ws8d_	All beta proteins	Cupredoxin-like	Cupredoxins	Plastocyanin/azurin-like	Mavicyanin	(Cucurbita pepo ) [TaxId: 3663 ],	SCOPe (2.08)
B	d1ws8b_	All beta proteins	Cupredoxin-like	Cupredoxins	Plastocyanin/azurin-like	Mavicyanin	(Cucurbita pepo ) [TaxId: 3663 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Plastocyanin/azurin-like	8031311	4002150	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Cupredoxins	8043689	3000886	SCOP2 (2022-06-29)
C	SCOP2B Superfamily	Cupredoxins	8043689	3000886	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Cupredoxins	8043689	3000886	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Cupredoxins	8043689	3000886	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Cu_bind_like	e1ws8A1	A: beta sandwiches	X: Cupredoxin-like	H: Cupredoxin-related (From Topology)	T: Cupredoxin-related	F: Cu_bind_like	ECOD (1.6)
C	Cu_bind_like	e1ws8C1	A: beta sandwiches	X: Cupredoxin-like	H: Cupredoxin-related (From Topology)	T: Cupredoxin-related	F: Cu_bind_like	ECOD (1.6)
D	Cu_bind_like	e1ws8D1	A: beta sandwiches	X: Cupredoxin-like	H: Cupredoxin-related (From Topology)	T: Cupredoxin-related	F: Cu_bind_like	ECOD (1.6)
B	Cu_bind_like	e1ws8B1	A: beta sandwiches	X: Cupredoxin-like	H: Cupredoxin-related (From Topology)	T: Cupredoxin-related	F: Cu_bind_like	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.420	Mainly Beta	Sandwich	Immunoglobulin-like	Cupredoxins - blue copper proteins	CATH (4.3.0)
C	2.60.40.420	Mainly Beta	Sandwich	Immunoglobulin-like	Cupredoxins - blue copper proteins	CATH (4.3.0)
D	2.60.40.420	Mainly Beta	Sandwich	Immunoglobulin-like	Cupredoxins - blue copper proteins	CATH (4.3.0)
B	2.60.40.420	Mainly Beta	Sandwich	Immunoglobulin-like	Cupredoxins - blue copper proteins	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	mavicyanin	electron transfer activity cation binding ion binding binding metal ion binding small molecule binding	-	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR003245	Phytocyanin domain	Domain
A, B, C, D	IPR039391	Phytocyanin-like	Family
A, B, C, D	IPR028871	Blue (type 1) copper protein, binding site	Binding Site
A, B, C, D	IPR008972	Cupredoxin	Homologous Superfamily
A, B, C, D	IPR041845	Mavicyanin	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.