Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyGcvT aminomethyltransferase-like8056086 4000062 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyAminomethyltransferase beta-barrel domain-like8056088 3000024 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyFolate-binding domain-like8056087 3000025 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APRK09559e1vlyA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Aminomethyltransferase beta-barrel domainF: PRK09559ECOD (1.6)
ASortasee1vlyA3 A: a+b two layersX: Alpha-beta plaitsH: Aminomethyltransferase folate-binding domain (From Topology)T: Aminomethyltransferase folate-binding domainF: SortaseECOD (1.6)
AUNK_F_TYPEe1vlyA4 A: a+b two layersX: Alpha-beta plaitsH: Aminomethyltransferase folate-binding domain (From Topology)T: Aminomethyltransferase folate-binding domainF: UNK_F_TYPEECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.70.1630 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
A3.30.70.1400 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Aminomethyltransferase beta-barrel domainsCATH (4.3.0)
A2.40.30.160 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF21130YgfZ, beta-barrel domain (YgfZ_barrel)YgfZ, beta-barrel domainYgfZ is a folate-binding protein involved in regulating the level of ATP-dnaA and in the modification of some tRNAs [1,2]. It consists of a folate-binding domain at the N-terminal (Pfam:PF01571) and a six-stranded antiparallel beta-barrel at the C-te ...YgfZ is a folate-binding protein involved in regulating the level of ATP-dnaA and in the modification of some tRNAs [1,2]. It consists of a folate-binding domain at the N-terminal (Pfam:PF01571) and a six-stranded antiparallel beta-barrel at the C-terminal, represented in this entry, with identical topology found at the C-terminal of elongation factors Tu and eEF-1alpha and in the gamma subunit of the initiation factor eIF2 [1].
Domain
PF01571Aminomethyltransferase folate-binding domain (GCV_T)Aminomethyltransferase folate-binding domainThis is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl tran ...This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl transferase.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Unknown protein from 2D-page