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 1U0Q | pdb_00001u0q

Structure of a Llama VHH domain raised against a carbazole molecule

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd1u0qb_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Ad1u0qa_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BBe1u0qB1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: BECOD (v295.2)
ARibosomal_S15e1u0qA1 A: alpha arraysX: Globin-likeH: Globin-likeT: Globin-likeF: Ribosomal_S15ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A, B
Llama heavy chain VH domain anti-carbazole VH Lama glama (llama) IGHV3S1*01, IGHJ4*01 V-DOMAIN VH IG (VH) IMGT (202643-0)

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
PCA Parent Component: GLN

:  AA0031

:  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420