1TDT | pdb_00001tdt

THREE-DIMENSIONAL STRUCTURE OF TETRAHYDRODIPICOLINATE-N-SUCCINYLTRANSFERASE

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d1tdtc_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD	Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD	(Mycobacterium tuberculosis variant bovis ) [TaxId: 1765 ],	SCOPe (2.08)
B	d1tdtb_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD	Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD	(Mycobacterium tuberculosis variant bovis ) [TaxId: 1765 ],	SCOPe (2.08)
A	d1tdta_	All beta proteins	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD	Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD	(Mycobacterium tuberculosis variant bovis ) [TaxId: 1765 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8042987	3001804	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8042987	3001804	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Trimeric LpxA-like enzymes	8042987	3001804	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	PolyA_pol	e1tdtC3	A: a/b three-layered sandwiches	X: POZ domain	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: PolyA_pol	ECOD (v294.1)
B	ChapFlgA	e1tdtB1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: Thioredoxin-like	T: Thioredoxin-like	F: ChapFlgA	ECOD (v294.1)
A	TPR_2, TPR_P4H	e1tdtA1	A: a/b three-layered sandwiches	X: Ribonuclease H-like	H: ARM repeat	T: ARM repeat	F: TPR_2, TPR_P4H	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	1.10.166.10	Mainly Alpha	Orthogonal Bundle	Tetrahydrodipicolinate-N-succinyltransferase	Chain A, domain 1	CATH (4.3.0)
C	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (4.3.0)
B	1.10.166.10	Mainly Alpha	Orthogonal Bundle	Tetrahydrodipicolinate-N-succinyltransferase	Chain A, domain 1	CATH (4.3.0)
B	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (4.3.0)
A	1.10.166.10	Mainly Alpha	Orthogonal Bundle	Tetrahydrodipicolinate-N-succinyltransferase	Chain A, domain 1	CATH (4.3.0)
A	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	TETRAHYDRODIPICOLINATE-N-SUCCINYLTRANSFERASE	N-succinyltransferase activity acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity succinyltransferase activity catalytic activity N-acyltransferase activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR023180	Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1	Domain
A, B, C	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
A, B, C	IPR005664	Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family	Family
A, B, C	IPR018357	Hexapeptide transferase, conserved site	Conserved Site
A, B, C	IPR037133	Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily	Homologous Superfamily
A, B, C	IPR001451	Hexapeptide repeat	Repeat

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.