1SP3 | pdb_00001sp3

Crystal structure of octaheme cytochrome c from Shewanella oneidensis

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1sp3a_	All alpha proteins	Multiheme cytochromes	Multiheme cytochromes	Di-heme elbow motif	Putative Cytochrome c	(Shewanella oneidensis MR-1 ) [TaxId: 211586 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Tetrathionate reductase-like	8003678	4000359	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Di-heme elbow motif	8003679	3000145	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Di-heme elbow motif	8003680	3000145	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Di-heme elbow motif	8003681	3000145	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Cytochrome_cB, Cytochrome_C554	e1sp3A1	A: few secondary structure elements	X: Multiheme cytochromes	H: Di-heme elbow motif	T: Di-heme elbow motif	F: Cytochrome_cB, Cytochrome_C554	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF11783	Cytochrome c bacterial (Cytochrome_cB)	Cytochrome c bacterial	-	Family
A	PF13435	Cytochrome c554 and c-prime (Cytochrome_C554)	Cytochrome c554 and c-prime	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	cytochrome c, putative	oxidoreductase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR051829	Multiheme_Cytochr_ET	Unknown
A	IPR036280	Multiheme cytochrome superfamily	Homologous Superfamily
A	IPR023155	Cytochrome c-552/4	Domain
A	IPR024673	Octaheme c-type cytochrome	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.