1SFU
Crystal structure of the viral Zalpha domain bound to left-handed Z-DNA
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | d1sfua_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | Z-DNA binding domain | 34L | (Yaba-like disease virus ) [TaxId: 132475 ], | SCOPe (2.08) |
D [auth B] | d1sfub_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | Z-DNA binding domain | 34L | (Yaba-like disease virus ) [TaxId: 132475 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2 Family | Z-DNA binding domain | 8003083 | 4000211 | SCOP2 (2022-06-29) |
C [auth A] | SCOP2 Superfamily | Winged helix DNA-binding domain | 8057680 | 3000034 | SCOP2 (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8057680 | 3000034 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | PF02295 | e1sfuA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF02295 | ECOD (1.6) |
D [auth B] | PF02295 | e1sfuB1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF02295 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
D [auth B] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], D [auth B] | PF02295 | Adenosine deaminase z-alpha domain (z-alpha) | Adenosine deaminase z-alpha domain | This family consists of the N-terminus and thus the z-alpha domain of double-stranded RNA-specific adenosine deaminase (ADAR), an RNA- editing enzyme. The z-alpha domain is a Z-DNA binding domain, and binding of this region to B-DNA has been shown to ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], D [auth B] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
C [auth A], D [auth B] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
C [auth A], D [auth B] | IPR009179 | Protein E3 | Family |
C [auth A], D [auth B] | IPR042371 | Z-binding domain | Domain |
C [auth A], D [auth B] | IPR014720 | Double-stranded RNA-binding domain | Domain |