1S4K
Putative cytoplasmic protein from Salmonella typhimurium
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1s4ka1 | All alpha proteins | lambda repressor-like DNA-binding domains | lambda repressor-like DNA-binding domains | YdiL-like | Putative cytoplasmic protein YdiL | (Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ) [TaxId: 99287 ], | SCOPe (2.08) |
A | d1s4ka2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ) [TaxId: 99287 ], | SCOPe (2.08) |
B | d1s4kb1 | All alpha proteins | lambda repressor-like DNA-binding domains | lambda repressor-like DNA-binding domains | YdiL-like | Putative cytoplasmic protein YdiL | (Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ) [TaxId: 99287 ], | SCOPe (2.08) |
B | d1s4kb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ) [TaxId: 99287 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | YdiL-like | 8026767 | 4002426 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | lambda C1 repressor DNA-binding domain-like | 8039146 | 3000119 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | lambda C1 repressor DNA-binding domain-like | 8039146 | 3000119 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF08965 | e1s4kA1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: PF08965 | ECOD (1.6) |
B | PF08965 | e1s4kB1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: PF08965 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.3100.10 | Mainly Alpha | Orthogonal Bundle | Putative cytoplasmic protein | Putative cytoplasmic protein | CATH (4.3.0) |
B | 1.10.3100.10 | Mainly Alpha | Orthogonal Bundle | Putative cytoplasmic protein | Putative cytoplasmic protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08965 | Domain of unknown function (DUF1870) (DUF1870) | Domain of unknown function (DUF1870) | This domain is found in a set of hypothetical bacterial proteins. It contains a helix-turn-helix domain so may be a DNA-binding protein. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
putative cytoplasmic protein ydil | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR027910 | YdiL domain superfamily | Homologous Superfamily | |
IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | Homologous Superfamily | |
IPR015060 | Protein of unknown function DUF1870 | Family |