Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1s28a1 Alpha and beta proteins (a+b) Secretion chaperone-like Type III secretory system chaperone-like Type III secretory system chaperone AvrPphF ORF1, chaperone of AvrPphF ORF2 (Pseudomonas savastanoi pv. phaseolicola ) [TaxId: 319 ], SCOPe (2.08)
Ad1s28a2 Artifacts Tags Tags Tags N-terminal Tags (Pseudomonas savastanoi pv. phaseolicola ) [TaxId: 319 ], SCOPe (2.08)
Bd1s28b1 Alpha and beta proteins (a+b) Secretion chaperone-like Type III secretory system chaperone-like Type III secretory system chaperone AvrPphF ORF1, chaperone of AvrPphF ORF2 (Pseudomonas savastanoi pv. phaseolicola ) [TaxId: 319 ], SCOPe (2.08)
Bd1s28b2 Artifacts Tags Tags Tags N-terminal Tags (Pseudomonas savastanoi pv. phaseolicola ) [TaxId: 319 ], SCOPe (2.08)
Cd1s28c1 Alpha and beta proteins (a+b) Secretion chaperone-like Type III secretory system chaperone-like Type III secretory system chaperone AvrPphF ORF1, chaperone of AvrPphF ORF2 (Pseudomonas savastanoi pv. phaseolicola ) [TaxId: 319 ], SCOPe (2.08)
Cd1s28c2 Artifacts Tags Tags Tags N-terminal Tags (Pseudomonas savastanoi pv. phaseolicola ) [TaxId: 319 ], SCOPe (2.08)
Dd1s28d1 Alpha and beta proteins (a+b) Secretion chaperone-like Type III secretory system chaperone-like Type III secretory system chaperone AvrPphF ORF1, chaperone of AvrPphF ORF2 (Pseudomonas savastanoi pv. phaseolicola ) [TaxId: 319 ], SCOPe (2.08)
Dd1s28d2 Artifacts Tags Tags Tags N-terminal Tags (Pseudomonas savastanoi pv. phaseolicola ) [TaxId: 319 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyType III secretory system chaperone8026715 4003372 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyType III secretory system chaperone-like8039094 3000727 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyType III secretory system chaperone-like8039094 3000727 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyType III secretory system chaperone-like8039094 3000727 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyType III secretory system chaperone-like8039094 3000727 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF05932e1s28A1 A: a+b two layersX: Type III secretory system chaperone-likeH: Type III secretory system chaperone (From Topology)T: Type III secretory system chaperoneF: PF05932ECOD (1.6)
BPF05932e1s28B1 A: a+b two layersX: Type III secretory system chaperone-likeH: Type III secretory system chaperone (From Topology)T: Type III secretory system chaperoneF: PF05932ECOD (1.6)
CPF05932e1s28C1 A: a+b two layersX: Type III secretory system chaperone-likeH: Type III secretory system chaperone (From Topology)T: Type III secretory system chaperoneF: PF05932ECOD (1.6)
DPF05932e1s28D1 A: a+b two layersX: Type III secretory system chaperone-likeH: Type III secretory system chaperone (From Topology)T: Type III secretory system chaperoneF: PF05932ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.1460.10 Alpha Beta 2-Layer Sandwich Yope Regulator Chain: A,CATH (4.3.0)
B3.30.1460.10 Alpha Beta 2-Layer Sandwich Yope Regulator Chain: A,CATH (4.3.0)
C3.30.1460.10 Alpha Beta 2-Layer Sandwich Yope Regulator Chain: A,CATH (4.3.0)
D3.30.1460.10 Alpha Beta 2-Layer Sandwich Yope Regulator Chain: A,CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF05932Tir chaperone protein (CesT) family (CesT)Tir chaperone protein (CesT) familyThis family consists of a number of bacterial sequences which are highly similar to the Tir chaperone protein in E. Coli. In many Gram-negative bacteria, a key indicator of pathogenic potential is the possession of a specialised type III secretion sy ...This family consists of a number of bacterial sequences which are highly similar to the Tir chaperone protein in E. Coli. In many Gram-negative bacteria, a key indicator of pathogenic potential is the possession of a specialised type III secretion system, which is utilised to deliver virulence effector proteins directly into the host cell cytosol. Many of the proteins secreted from such systems require small cytosolic chaperones to maintain the secreted substrates in a secretion-competent state. CesT serves a chaperone function for the enteropathogenic Escherichia coli (EPEC) translocated intimin receptor (Tir) protein, which confers upon EPEC the ability to alter host cell morphology following intimate bacterial attachment [1]. This family also contains several DspF and related sequences from several plant pathogenic bacteria. The "disease-specific" (dsp) region next to the hrp gene cluster of Erwinia amylovora is required for pathogenicity but not for elicitation of the hypersensitive reaction. DspF and AvrF are small (16 kDa and 14 kDa) and acidic with predicted amphipathic alpha helices in their C termini; they resemble chaperones for virulence factors secreted by type III secretion systems of animal pathogens [2].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR010261Tir chaperone protein (CesT) familyFamily