Crystal Structure of Stecrisp, a Member of CRISP Family from Trimeresurus Stejnegeri Refined at 1.6 Angstroms Resolution: Structual relationship of the two domains
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d1rc9a1 | Alpha and beta proteins (a+b) | PR-1-like | PR-1-like | PR-1-like | Cysteine-rich secretory protein (SteCRISP) | (Trimeresurus stejnegeri ) [TaxId: 39682 ], | SCOPe (2.08) |
| A | d1rc9a2 | Small proteins | Crisp domain-like | Crisp domain-like | Crisp domain | Cysteine-rich secretory protein (SteCRISP) | (Trimeresurus stejnegeri ) [TaxId: 39682 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | PR-1-like | 8029839 | 4001882 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | Crisp domain | 8029840 | 4003921 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | PR-1-like | 8042218 | 3000495 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Crisp domain-like | 8042219 | 3000917 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | CAP_1 | e1rc9A1 | A: a+b three layers | X: PR-1-like (From Topology) | H: PR-1-like (From Topology) | T: PR-1-like | F: CAP_1 | ECOD (1.6) |
| A | Crisp | e1rc9A2 | A: few secondary structure elements | X: Sea anemone toxin k-like | H: Sea anemone toxin k-related (From Topology) | T: Sea anemone toxin k-related | F: Crisp | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.40.33.10 | Alpha Beta | 3-Layer(aba) Sandwich | Pathogenesis-related Protein p14a | CAP | CATH (4.3.0) |
| A | 1.10.10.740 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Crisp domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| cysteine-rich secretory protein |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR013871 | Cysteine-rich secretory protein | Domain | |
| IPR003582 | ShKT domain | Domain | |
| IPR014044 | CAP domain | Domain | |
| IPR042076 | Crisp-like domain | Homologous Superfamily | |
| IPR035940 | CAP superfamily | Homologous Superfamily | |
| IPR002413 | Venom allergen 5-like | Family | |
| IPR034117 | Cysteine-rich secretory protein, SCP domain | Domain | |
| IPR001283 | Cysteine-rich secretory protein-related | Family | |
| IPR018244 | Allergen V5/Tpx-1-related, conserved site | Conserved Site |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Monotopic/peripheral | All alpha monotopic/peripheral | Sea anemone toxin-like proteins | Cysteine-rich secretory protein family |
