1QS1 | pdb_00001qs1

CRYSTAL STRUCTURE OF VEGETATIVE INSECTICIDAL PROTEIN2 (VIP2)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d1qs1d1	Alpha and beta proteins (a+b)	ADP-ribosylation	ADP-ribosylation	ADP-ribosylating toxins	Vegetative insecticidal protein 2 (VIP2)	(Bacillus cereus ) [TaxId: 1396 ],	SCOPe (2.08)
C	d1qs1c1	Alpha and beta proteins (a+b)	ADP-ribosylation	ADP-ribosylation	ADP-ribosylating toxins	Vegetative insecticidal protein 2 (VIP2)	(Bacillus cereus ) [TaxId: 1396 ],	SCOPe (2.08)
B	d1qs1b1	Alpha and beta proteins (a+b)	ADP-ribosylation	ADP-ribosylation	ADP-ribosylating toxins	Vegetative insecticidal protein 2 (VIP2)	(Bacillus cereus ) [TaxId: 1396 ],	SCOPe (2.08)
A	d1qs1a1	Alpha and beta proteins (a+b)	ADP-ribosylation	ADP-ribosylation	ADP-ribosylating toxins	Vegetative insecticidal protein 2 (VIP2)	(Bacillus cereus ) [TaxId: 1396 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	ADP-ribosylation	8037012	3001208	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	ADP-ribosylation	8037010	3001208	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	ADP-ribosylation	8037012	3001208	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	ADP-ribosylation	8037010	3001208	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	ADP-ribosylation	8037012	3001208	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	ADP-ribosylation	8037010	3001208	SCOP2B (2022-06-29)
A	SCOP2 Family	ADP-ribosylating toxins	8024631	4002404	SCOP2 (2022-06-29)
A	SCOP2 Family	ADP-ribosylating toxins	8024633	4002404	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	ADP-ribosylation	8037010	3001208	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	ADP-ribosylation	8037012	3001208	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Met_synt_B12	e1qs1D1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: Met_synt_B12	ECOD (develop294)
C	Met_synt_B12	e1qs1C1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: Met_synt_B12	ECOD (develop294)
B	Met_synt_B12	e1qs1B1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: Met_synt_B12	ECOD (develop294)
A	ADPrib_exo_Tox	e1qs1A1	A: few secondary structure elements	X: ADP-ribosylation	H: ADP-ribosylation	T: ADP-ribosylation	F: ADPrib_exo_Tox	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.90.176.10	Alpha Beta	Alpha-Beta Complex	Toxin ADP-ribosyltransferase	Chain A, domain 1	CATH (4.3.0)
C	3.90.176.10	Alpha Beta	Alpha-Beta Complex	Toxin ADP-ribosyltransferase	Chain A, domain 1	CATH (4.3.0)
B	3.90.176.10	Alpha Beta	Alpha-Beta Complex	Toxin ADP-ribosyltransferase	Chain A, domain 1	CATH (4.3.0)
A	3.90.176.10	Alpha Beta	Alpha-Beta Complex	Toxin ADP-ribosyltransferase	Chain A, domain 1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	ADP-RIBOSYLTRANSFERASE	binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	-	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR003540	ADP ribosyltransferase	Domain
A, B, C, D	IPR016013	Binary exotoxin A, clostridial type	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.