1PPR | pdb_00001ppr

PERIDININ-CHLOROPHYLL-PROTEIN OF AMPHIDINIUM CARTERAE

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C [auth O]	d1ppro1	All alpha proteins	Peridinin-chlorophyll protein	Peridinin-chlorophyll protein	Peridinin-chlorophyll protein	Peridinin-chlorophyll protein	(Amphidinium carterae ) [TaxId: 2961 ],	SCOPe (2.08)
B [auth N]	d1pprn1	All alpha proteins	Peridinin-chlorophyll protein	Peridinin-chlorophyll protein	Peridinin-chlorophyll protein	Peridinin-chlorophyll protein	(Amphidinium carterae ) [TaxId: 2961 ],	SCOPe (2.08)
A [auth M]	d1pprm1	All alpha proteins	Peridinin-chlorophyll protein	Peridinin-chlorophyll protein	Peridinin-chlorophyll protein	Peridinin-chlorophyll protein	(Amphidinium carterae ) [TaxId: 2961 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C [auth O]	SCOP2B Superfamily	Peridinin-chlorophyll protein	8038916	3001663	SCOP2B (2022-06-29)
C [auth O]	SCOP2B Superfamily	Peridinin-chlorophyll protein	8038918	3001663	SCOP2B (2022-06-29)
B [auth N]	SCOP2B Superfamily	Peridinin-chlorophyll protein	8038916	3001663	SCOP2B (2022-06-29)
B [auth N]	SCOP2B Superfamily	Peridinin-chlorophyll protein	8038918	3001663	SCOP2B (2022-06-29)
A [auth M]	SCOP2 Family	Peridinin-chlorophyll protein	8026537	4001478	SCOP2 (2022-06-29)
A [auth M]	SCOP2 Family	Peridinin-chlorophyll protein	8026539	4001478	SCOP2 (2022-06-29)
A [auth M]	SCOP2 Superfamily	Peridinin-chlorophyll protein	8038916	3001663	SCOP2 (2022-06-29)
A [auth M]	SCOP2 Superfamily	Peridinin-chlorophyll protein	8038918	3001663	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth O]	Orbi_VP7	e1pprO1	A: alpha bundles	X: EGF-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Orbi_VP7	ECOD (develop294)
B [auth N]	Orbi_VP7	e1pprN1	A: alpha bundles	X: EGF-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Orbi_VP7	ECOD (develop294)
A [auth M]	PCP	e1pprM1	A: alpha bundles	X: Peridinin-chlorophyll protein	H: Peridinin-chlorophyll protein	T: Peridinin-chlorophyll protein	F: PCP	ECOD (develop294)
A [auth M]	Orbi_VP7	e1pprM2	A: alpha bundles	X: EGF-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Orbi_VP7	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C [auth O]	1.40.10.10	Mainly Alpha	Alpha solenoid	Peridinin-chlorophyll Protein, Chain M	Peridinin-chlorophyll A binding	CATH (4.3.0)
B [auth N]	1.40.10.10	Mainly Alpha	Alpha solenoid	Peridinin-chlorophyll Protein, Chain M	Peridinin-chlorophyll A binding	CATH (4.3.0)
A [auth M]	1.40.10.10	Mainly Alpha	Alpha solenoid	Peridinin-chlorophyll Protein, Chain M	Peridinin-chlorophyll A binding	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth M], B [auth N], C [auth O]	PERIDININ-CHLOROPHYLL PROTEIN	chlorophyll binding binding tetrapyrrole binding	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast protein-containing complex light-harvesting complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth M], B [auth N], C [auth O]	IPR003376	Peridinin-chlorophyll A binding protein	Family
A [auth M], B [auth N], C [auth O]	IPR036550	Peridinin-chlorophyll A binding superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.