1PP6

VVA2 (STRIP CRYSTAL FORM)

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Cd1pp6c_ Alpha and beta proteins (a+b) CytB endotoxin-like CytB endotoxin-like CytB endotoxin-like Volvatoxin A2 (Volvariella volvacea ) [TaxId: 36659 ], SCOPe (2.08)
Ad1pp6a_ Alpha and beta proteins (a+b) CytB endotoxin-like CytB endotoxin-like CytB endotoxin-like Volvatoxin A2 (Volvariella volvacea ) [TaxId: 36659 ], SCOPe (2.08)
Bd1pp6b_ Alpha and beta proteins (a+b) CytB endotoxin-like CytB endotoxin-like CytB endotoxin-like Volvatoxin A2 (Volvariella volvacea ) [TaxId: 36659 ], SCOPe (2.08)
Dd1pp6d_ Alpha and beta proteins (a+b) CytB endotoxin-like CytB endotoxin-like CytB endotoxin-like Volvatoxin A2 (Volvariella volvacea ) [TaxId: 36659 ], SCOPe (2.08)
Ed1pp6e_ Alpha and beta proteins (a+b) CytB endotoxin-like CytB endotoxin-like CytB endotoxin-like Volvatoxin A2 (Volvariella volvacea ) [TaxId: 36659 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyCytB endotoxin-like8038206 3000359 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCytB endotoxin-like8038206 3000359 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCytB endotoxin-like8038206 3000359 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCytB endotoxin-like8038206 3000359 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCytB endotoxin-like8038206 3000359 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CPF01338e1pp6C1 A: a+b three layersX: CytB endotoxin-like (Pfam 01338) (From Topology)H: CytB endotoxin-like (Pfam 01338) (From Topology)T: CytB endotoxin-like (Pfam 01338)F: PF01338ECOD (1.6)
APF01338e1pp6A1 A: a+b three layersX: CytB endotoxin-like (Pfam 01338) (From Topology)H: CytB endotoxin-like (Pfam 01338) (From Topology)T: CytB endotoxin-like (Pfam 01338)F: PF01338ECOD (1.6)
BPF01338e1pp6B1 A: a+b three layersX: CytB endotoxin-like (Pfam 01338) (From Topology)H: CytB endotoxin-like (Pfam 01338) (From Topology)T: CytB endotoxin-like (Pfam 01338)F: PF01338ECOD (1.6)
DPF01338e1pp6D1 A: a+b three layersX: CytB endotoxin-like (Pfam 01338) (From Topology)H: CytB endotoxin-like (Pfam 01338) (From Topology)T: CytB endotoxin-like (Pfam 01338)F: PF01338ECOD (1.6)
EPF01338e1pp6E1 A: a+b three layersX: CytB endotoxin-like (Pfam 01338) (From Topology)H: CytB endotoxin-like (Pfam 01338) (From Topology)T: CytB endotoxin-like (Pfam 01338)F: PF01338ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C3.40.198.10 Alpha Beta 3-Layer(aba) Sandwich Delta-endotoxin CytB Delta-endotoxin CytB-likeCATH (4.3.0)
A3.40.198.10 Alpha Beta 3-Layer(aba) Sandwich Delta-endotoxin CytB Delta-endotoxin CytB-likeCATH (4.3.0)
B3.40.198.10 Alpha Beta 3-Layer(aba) Sandwich Delta-endotoxin CytB Delta-endotoxin CytB-likeCATH (4.3.0)
D3.40.198.10 Alpha Beta 3-Layer(aba) Sandwich Delta-endotoxin CytB Delta-endotoxin CytB-likeCATH (4.3.0)
E3.40.198.10 Alpha Beta 3-Layer(aba) Sandwich Delta-endotoxin CytB Delta-endotoxin CytB-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF01338Bacillus thuringiensis toxin (Bac_thur_toxin)Bacillus thuringiensis toxin- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Volvatoxin A2- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR001615Delta-endotoxin CytBFamily
A, B, C, D, E
IPR035918Delta-endotoxin CytB-like superfamilyHomologous Superfamily