1PD3 | pdb_00001pd3

Influenza A NEP M1-binding domain

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d1pd3b_	All alpha proteins	ROP-like	Nonstructural protein ns2, Nep, M1-binding domain	Nonstructural protein ns2, Nep, M1-binding domain	Nonstructural protein ns2, Nep, M1-binding domain	(Influenza A virus ) [TaxId: 11320 ],	SCOPe (2.08)
A	d1pd3a_	All alpha proteins	ROP-like	Nonstructural protein ns2, Nep, M1-binding domain	Nonstructural protein ns2, Nep, M1-binding domain	Nonstructural protein ns2, Nep, M1-binding domain	(Influenza A virus ) [TaxId: 11320 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Nonstructural protein ns2, Nep, M1-binding domain	8038554	3000875	SCOP2B (2022-06-29)
A	SCOP2 Family	Nonstructural protein ns2, Nep, M1-binding domain	8026175	4000647	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Nonstructural protein ns2, Nep, M1-binding domain	8038554	3000875	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Ribonuclease_3	e1pd3B1	A: a/b three-layered sandwiches	X: RNase III catalytic domain-like	H: RNase III catalytic domain-like	T: RNase III catalytic domain-like	F: Ribonuclease_3	ECOD (v294.1)
A	Flu_NS2	e1pd3A1	A: alpha bundles	X: ROP-like	H: Nonstructural protein ns2, Nep, M1-binding domain	T: Nonstructural protein ns2, Nep, M1-binding domain	F: Flu_NS2	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.10.287.230	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
A	1.10.287.230	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Nonstructural protein NS2	-	exit from host cell biological process involved in interspecies interaction between organisms viral process exit of virus from host cell nucleus through nuclear pore exit of virus from host cell nucleus biological process involved in interaction with host biological process involved in symbiotic interaction	host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle virion component extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR000968	Influenza nuclear export protein NS2	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.