1NTO | pdb_00001nto

N249Y MUTANT OF ALCOHOL DEHYDROGENASE FROM THE ARCHAEON SULFOLOBUS SOLFATARICUS-MONOCLINIC CRYSTAL FORM

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1ntoa1	All beta proteins	GroES-like	GroES-like	Alcohol dehydrogenase-like, N-terminal domain	Alcohol dehydrogenase	(Saccharolobus solfataricus ) [TaxId: 2287 ],	SCOPe (2.08)
A	d1ntoa2	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Alcohol dehydrogenase-like, C-terminal domain	Alcohol dehydrogenase	(Saccharolobus solfataricus ) [TaxId: 2287 ],	SCOPe (2.08)
B	d1ntob1	All beta proteins	GroES-like	GroES-like	Alcohol dehydrogenase-like, N-terminal domain	Alcohol dehydrogenase	(Saccharolobus solfataricus ) [TaxId: 2287 ],	SCOPe (2.08)
B	d1ntob2	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Alcohol dehydrogenase-like, C-terminal domain	Alcohol dehydrogenase	(Saccharolobus solfataricus ) [TaxId: 2287 ],	SCOPe (2.08)
C	d1ntoc1	All beta proteins	GroES-like	GroES-like	Alcohol dehydrogenase-like, N-terminal domain	Alcohol dehydrogenase	(Saccharolobus solfataricus ) [TaxId: 2287 ],	SCOPe (2.08)
C	d1ntoc2	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Alcohol dehydrogenase-like, C-terminal domain	Alcohol dehydrogenase	(Saccharolobus solfataricus ) [TaxId: 2287 ],	SCOPe (2.08)
D	d1ntod1	All beta proteins	GroES-like	GroES-like	Alcohol dehydrogenase-like, N-terminal domain	Alcohol dehydrogenase	(Saccharolobus solfataricus ) [TaxId: 2287 ],	SCOPe (2.08)
D	d1ntod2	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Alcohol dehydrogenase-like, C-terminal domain	Alcohol dehydrogenase	(Saccharolobus solfataricus ) [TaxId: 2287 ],	SCOPe (2.08)
E	d1ntoe1	All beta proteins	GroES-like	GroES-like	Alcohol dehydrogenase-like, N-terminal domain	Alcohol dehydrogenase	(Saccharolobus solfataricus ) [TaxId: 2287 ],	SCOPe (2.08)
E	d1ntoe2	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Alcohol dehydrogenase-like, C-terminal domain	Alcohol dehydrogenase	(Saccharolobus solfataricus ) [TaxId: 2287 ],	SCOPe (2.08)
F [auth H]	d1ntoh1	All beta proteins	GroES-like	GroES-like	Alcohol dehydrogenase-like, N-terminal domain	Alcohol dehydrogenase	(Saccharolobus solfataricus ) [TaxId: 2287 ],	SCOPe (2.08)
F [auth H]	d1ntoh2	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Alcohol dehydrogenase-like, C-terminal domain	Alcohol dehydrogenase	(Saccharolobus solfataricus ) [TaxId: 2287 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Zinc-containing alcohol dehydrogenase-like	8057544	3000040	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	GroES-like	8057543	3000002	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Zinc-containing alcohol dehydrogenase-like	8057544	3000040	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	GroES-like	8057543	3000002	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Zinc-containing alcohol dehydrogenase-like	8057544	3000040	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	GroES-like	8057543	3000002	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	GroES-like	8057543	3000002	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Zinc-containing alcohol dehydrogenase-like	8057544	3000040	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	GroES-like	8057543	3000002	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Zinc-containing alcohol dehydrogenase-like	8057544	3000040	SCOP2B (2022-06-29)
F [auth H]	SCOP2B Superfamily	Zinc-containing alcohol dehydrogenase-like	8057544	3000040	SCOP2B (2022-06-29)
F [auth H]	SCOP2B Superfamily	GroES-like	8057543	3000002	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Cpn10	e1ntoA1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Cpn10	ECOD (v294.1)
A	Epimerase	e1ntoA2	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: winged helix domain	F: Epimerase	ECOD (v294.1)
B	Cpn10	e1ntoB1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Cpn10	ECOD (v294.1)
B	Epimerase	e1ntoB2	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: winged helix domain	F: Epimerase	ECOD (v294.1)
C	Cpn10	e1ntoC1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Cpn10	ECOD (v294.1)
C	Epimerase	e1ntoC2	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: winged helix domain	F: Epimerase	ECOD (v294.1)
D	Cpn10	e1ntoD1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Cpn10	ECOD (v294.1)
D	Epimerase	e1ntoD2	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: winged helix domain	F: Epimerase	ECOD (v294.1)
E	Cpn10	e1ntoE1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Cpn10	ECOD (v294.1)
E	Epimerase	e1ntoE2	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: winged helix domain	F: Epimerase	ECOD (v294.1)
F [auth H]	Cpn10	e1ntoH1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Cpn10	ECOD (v294.1)
F [auth H]	Epimerase	e1ntoH2	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: winged helix domain	F: Epimerase	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.90.180.10	Alpha Beta	Alpha-Beta Complex	Quinone Oxidoreductase	Chain A, domain 1	CATH (4.3.0)
A	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
B	3.90.180.10	Alpha Beta	Alpha-Beta Complex	Quinone Oxidoreductase	Chain A, domain 1	CATH (4.3.0)
B	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
C	3.90.180.10	Alpha Beta	Alpha-Beta Complex	Quinone Oxidoreductase	Chain A, domain 1	CATH (4.3.0)
C	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
D	3.90.180.10	Alpha Beta	Alpha-Beta Complex	Quinone Oxidoreductase	Chain A, domain 1	CATH (4.3.0)
D	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
E	3.90.180.10	Alpha Beta	Alpha-Beta Complex	Quinone Oxidoreductase	Chain A, domain 1	CATH (4.3.0)
E	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)
F [auth H]	3.90.180.10	Alpha Beta	Alpha-Beta Complex	Quinone Oxidoreductase	Chain A, domain 1	CATH (4.3.0)
F [auth H]	3.40.50.720	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	NAD(P)-binding Rossmann-like Domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E, A, B, C, D, E, F [auth H]	PF00107	Zinc-binding dehydrogenase (ADH_zinc_N)	Zinc-binding dehydrogenase		Domain
A, B, C, D, E, A, B, C, D, E, F [auth H]	PF08240	Alcohol dehydrogenase GroES-like domain (ADH_N)	Alcohol dehydrogenase GroES-like domain	This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure [1-2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E, A, B, C, D, E, F [auth H]	NAD-dependent alcohol dehydrogenase	oxidoreductase activity catalytic activity alcohol dehydrogenase [NAD(P)+] activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on CH-OH group of donors alcohol dehydrogenase (NAD+) activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E, A, B, C, D, E, F [auth H]	IPR002328	Alcohol dehydrogenase, zinc-type, conserved site	Conserved Site
A, B, C, D, E, A, B, C, D, E, F [auth H]	IPR013154	Alcohol dehydrogenase-like, N-terminal	Domain
A, B, C, D, E, A, B, C, D, E, F [auth H]	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A, B, C, D, E, A, B, C, D, E, F [auth H]	IPR011032	GroES-like superfamily	Homologous Superfamily
A, B, C, D, E, A, B, C, D, E, F [auth H]	IPR013149	Alcohol dehydrogenase-like, C-terminal	Domain
A, B, C, D, E, A, B, C, D, E, F [auth H]	IPR020843	Enoylreductase domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.