1MFR | pdb_00001mfr

CRYSTAL STRUCTURE OF M FERRITIN

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1mfra_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
B	d1mfrb_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
C	d1mfrc_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
D	d1mfrd_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
E	d1mfre_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
F	d1mfrf_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
G	d1mfrg_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
I	d1mfri_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
J	d1mfrj_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
K	d1mfrk_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
M	d1mfrm_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
O	d1mfro_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
P	d1mfrp_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
R	d1mfrr_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
S	d1mfrs_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
U	d1mfru_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
V	d1mfrv_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
W	d1mfrw_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
X	d1mfrx_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
T	d1mfrt_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
Q	d1mfrq_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
N	d1mfrn_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
L	d1mfrl_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
H	d1mfrh_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	(Apo)ferritin	bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Cation_efflux	e1mfrA1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
B	Cation_efflux	e1mfrB1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
C	Cation_efflux	e1mfrC1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
D	Cation_efflux	e1mfrD1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
E	Cation_efflux	e1mfrE1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
F	Cation_efflux	e1mfrF1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
G	Cation_efflux	e1mfrG1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
I	Cation_efflux	e1mfrI1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
J	Cation_efflux	e1mfrJ1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
K	Cation_efflux	e1mfrK1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
M	Cation_efflux	e1mfrM1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
O	Cation_efflux	e1mfrO1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
P	Cation_efflux	e1mfrP1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
R	Cation_efflux	e1mfrR1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
S	Cation_efflux	e1mfrS1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
U	Cation_efflux	e1mfrU1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
V	Cation_efflux	e1mfrV1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
W	Cation_efflux	e1mfrW1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
X	Cation_efflux	e1mfrX1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
T	Cation_efflux	e1mfrT1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
Q	Cation_efflux	e1mfrQ1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
N	Cation_efflux	e1mfrN1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
L	Cation_efflux	e1mfrL1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)
H	Cation_efflux	e1mfrH1	A: alpha arrays	X: Urease, gamma-subunit	H: p53 tetramerization domain	T: p53 tetramerization domain	F: Cation_efflux	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
B	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
C	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
D	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
E	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
F	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
G	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
I	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
J	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
K	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
M	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
O	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
P	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
R	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
S	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
U	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
V	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
W	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
X	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
T	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
Q	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
N	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
L	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
H	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	M FERRITIN	cation binding transition metal ion binding iron ion binding ion binding binding ferrous iron binding metal ion binding small molecule binding ferric iron binding oxidoreductase activity, acting on metal ions oxidoreductase activity ferroxidase activity oxidoreductase activity, acting on metal ions, oxygen as acceptor catalytic activity	intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport monoatomic ion transport monoatomic cation transport establishment of localization metal ion transport	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR009040	Ferritin-like diiron domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR012347	Ferritin-like	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR009078	Ferritin-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR008331	Ferritin/DPS domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR001519	Ferritin	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR014034	Ferritin, conserved site	Conserved Site

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.