1LQL | pdb_00001lql

Crystal structure of OsmC like protein from Mycoplasma pneumoniae

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
J	d1lqlj1	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	Ohr/OsmC resistance proteins	Hypothetical protein MPN625	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
J	d1lqlj2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
I	d1lqli1	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	Ohr/OsmC resistance proteins	Hypothetical protein MPN625	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
I	d1lqli2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
H	d1lqlh_	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	Ohr/OsmC resistance proteins	Hypothetical protein MPN625	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
G	d1lqlg_	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	Ohr/OsmC resistance proteins	Hypothetical protein MPN625	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
F	d1lqlf1	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	Ohr/OsmC resistance proteins	Hypothetical protein MPN625	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
F	d1lqlf2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
E	d1lqle_	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	Ohr/OsmC resistance proteins	Hypothetical protein MPN625	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
D	d1lqld1	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	Ohr/OsmC resistance proteins	Hypothetical protein MPN625	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
D	d1lqld2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
C	d1lqlc1	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	Ohr/OsmC resistance proteins	Hypothetical protein MPN625	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
C	d1lqlc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
B	d1lqlb_	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	Ohr/OsmC resistance proteins	Hypothetical protein MPN625	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
A	d1lqla_	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	Ohr/OsmC resistance proteins	Hypothetical protein MPN625	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J	SCOP2B Superfamily	OsmC-like	8036241	3000621	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	OsmC-like	8036241	3000621	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	OsmC-like	8036241	3000621	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	OsmC-like	8036241	3000621	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	OsmC-like	8036241	3000621	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	OsmC-like	8036241	3000621	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	OsmC-like	8036241	3000621	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	OsmC-like	8036241	3000621	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	OsmC-like	8036241	3000621	SCOP2B (2022-06-29)
A	SCOP2 Family	Ohr/OsmC resistance proteins	8023861	4003336	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	OsmC-like	8036241	3000621	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J	OsmC	e1lqlJ1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: OsmC	ECOD (develop294)
I	OsmC	e1lqlI1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: OsmC	ECOD (develop294)
H	OsmC	e1lqlH1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: OsmC	ECOD (develop294)
G	OsmC	e1lqlG1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: OsmC	ECOD (develop294)
F	OsmC	e1lqlF1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: OsmC	ECOD (develop294)
E	OsmC	e1lqlE1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: OsmC	ECOD (develop294)
D	OsmC	e1lqlD1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: OsmC	ECOD (develop294)
C	OsmC	e1lqlC1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: OsmC	ECOD (develop294)
B	PGI	e1lqlB1	A: alpha bundles	X: Ribonuclease H-like	H: Ribonuclease H-like	T: Ribonuclease H-like	F: PGI	ECOD (develop294)
A	OsmC	e1lqlA1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: OsmC-like	T: OsmC-like	F: OsmC	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
J	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
J	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
I	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
I	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
H	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
H	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
G	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
G	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
F	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
F	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
E	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
E	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
D	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
D	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
C	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
C	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
B	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
B	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
A	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
A	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	PF02566	OsmC-like protein (OsmC)	OsmC-like protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	osmotical inducible protein C like family	peroxidase activity oxidoreductase activity antioxidant activity oxidoreductase activity, acting on peroxide as acceptor catalytic activity	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR052924	OsmC/Ohr hydroperoxide reductase	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR015946	K homology domain-like, alpha/beta	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR036102	OsmC/Ohr superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR003718	OsmC/Ohr conserved domain	Domain