1JQK
Crystal structure of carbon monoxide dehydrogenase from Rhodospirillum rubrum
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Carbon monoxide dehydrogenase | 8024878 | 4003730 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Prismane protein cluster-binding domain-like | 8037257 | 3001926 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Prismane protein cluster-binding domain-like | 8055593 | 3001926 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Prismane protein N-terminal helical bundle-like | 8055594 | 3002294 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8037257 | 3001926 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8055593 | 3001926 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055594 | 3002294 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055594 | 3002294 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8037257 | 3001926 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8055593 | 3001926 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8037257 | 3001926 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055594 | 3002294 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8055593 | 3001926 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8055593 | 3001926 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055594 | 3002294 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8037257 | 3001926 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Prismane protein N-terminal helical bundle-like | 8055594 | 3002294 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8037257 | 3001926 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Prismane protein cluster-binding domain-like | 8055593 | 3001926 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF03063 | e1jqkA7 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
A | PF03063 | e1jqkA5 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
B | PF03063 | e1jqkB7 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
B | PF03063 | e1jqkB5 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
C | PF03063 | e1jqkC1 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
C | PF03063 | e1jqkC3 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
D | PF03063 | e1jqkD7 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
D | PF03063 | e1jqkD5 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
E | PF03063 | e1jqkE7 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
E | PF03063 | e1jqkE5 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
F | PF03063 | e1jqkF7 | A: alpha bundles | X: Helical bundle domain in prismane-like proteins (From Topology) | H: Helical bundle domain in prismane-like proteins (From Topology) | T: Helical bundle domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
F | PF03063 | e1jqkF5 | A: a/b three-layered sandwiches | X: Rossmann-like domain in prismane-like proteins (From Topology) | H: Rossmann-like domain in prismane-like proteins (From Topology) | T: Rossmann-like domain in prismane-like proteins | F: PF03063 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016099 | Prismane-like, alpha/beta-sandwich | Homologous Superfamily | |
IPR004137 | Hydroxylamine reductase/Ni-containing CO dehydrogenase | Family | |
IPR016101 | CO dehydrogenase, alpha-bundle | Homologous Superfamily | |
IPR010047 | Ni-containing CO dehydrogenase | Family | |
IPR011254 | Prismane-like superfamily | Homologous Superfamily |