1J72 | pdb_00001j72

Crystal Structure of Mutant Macrophage Capping Protein (Cap G) with Actin-severing Activity in the Ca2+-Free Form

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1j72a1	Alpha and beta proteins (a+b)	Gelsolin-like	Actin depolymerizing proteins	Gelsolin-like	Macrophage capping protein Cap G	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Gelsolin-like	8019890	4001825	SCOP2 (2022-06-29)
A	SCOP2 Family	Gelsolin-like	8019891	4001825	SCOP2 (2022-06-29)
A	SCOP2 Family	Gelsolin-like	8019893	4001825	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Actin depolymerizing proteins	8032270	3000430	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Actin depolymerizing proteins	8032271	3000430	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Actin depolymerizing proteins	8032273	3000430	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	NTP_transf_2, PAP_NTPase	e1j72A1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: NTP_transf_2, PAP_NTPase	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.20.10	Alpha Beta	3-Layer(aba) Sandwich	Severin	Severin	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00626	Gelsolin repeat (Gelsolin)	Gelsolin repeat		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Macrophage capping protein	protein binding binding protein domain specific binding cytoskeletal protein binding actin binding protein-containing complex binding actin filament binding ion binding phosphatidylinositol-4,5-bisphosphate binding anion binding phosphatidylinositol bisphosphate binding phospholipid binding lipid binding phosphatidylinositol phosphate binding protein binding binding protein domain specific binding cytoskeletal protein binding actin binding protein-containing complex binding actin filament binding ion binding phosphatidylinositol-4,5-bisphosphate binding anion binding phosphatidylinositol bisphosphate binding phospholipid binding lipid binding phosphatidylinositol phosphate binding phosphatidylinositol binding small molecule binding cell adhesion molecule binding cadherin binding	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis developmental process multicellular organism development multicellular organismal process central nervous system development anatomical structure development nervous system development system development cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis developmental process multicellular organism development multicellular organismal process central nervous system development anatomical structure development nervous system development system development actin filament severing actin filament-based process cell projection organization cell projection assembly regulation of cellular process regulation of cellular component size negative regulation of biological process protein-containing complex disassembly regulation of protein-containing complex disassembly actin filament depolymerization regulation of actin filament depolymerization actin filament capping regulation of biological quality negative regulation of supramolecular fiber organization negative regulation of actin filament polymerization cellular component disassembly regulation of biological process barbed-end actin filament capping negative regulation of cellular component organization actin filament organization regulation of organelle organization negative regulation of protein depolymerization negative regulation of protein-containing complex assembly regulation of protein polymerization regulation of supramolecular fiber organization supramolecular fiber organization regulation of cytoskeleton organization regulation of cellular component organization regulation of actin filament-based process regulation of protein-containing complex assembly negative regulation of protein-containing complex disassembly negative regulation of cellular process negative regulation of protein polymerization regulation of actin filament polymerization actin polymerization or depolymerization protein polymerization regulation of actin filament organization actin cytoskeleton organization actin filament polymerization regulation of protein depolymerization negative regulation of cytoskeleton organization regulation of actin polymerization or depolymerization biological regulation regulation of cellular component biogenesis organelle organization negative regulation of organelle organization regulation of actin filament length regulation of actin cytoskeleton organization negative regulation of actin filament depolymerization protein depolymerization cytoskeleton organization regulation of anatomical structure size	cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle membraneless organelle nuclear lumen pigment granule intracellular vesicle melanosome cytoplasmic vesicle cytoplasm vesicle extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space extracellular membrane-bounded organelle cytoskeleton actin cytoskeleton microtubule organizing center centriole microtubule cytoskeleton mitotic spindle spindle nucleoplasm chromosome protein-containing complex F-actin capping protein complex ruffle Flemming body midbody

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR029006	ADF-H/Gelsolin-like domain superfamily	Homologous Superfamily
A	IPR007122	Villin/Gelsolin	Family
A	IPR007123	Gelsolin-like domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P40121	acute myeloid leukemia renal cell carcinoma papillary renal cell carcinoma keloid sarcomatoid renal cell carcinoma collecting duct carcinoma Liver Cirrhosis, Experimental chromophobe renal cell carcinoma malignant glioma myocardial infarction pancreatic ductal adenocarcinoma tuberculosis clear cell renal carcinoma cystic fibrosis heart disease acute myeloid leukemia renal cell carcinoma papillary renal cell carcinoma keloid sarcomatoid renal cell carcinoma collecting duct carcinoma Liver Cirrhosis, Experimental chromophobe renal cell carcinoma malignant glioma myocardial infarction pancreatic ductal adenocarcinoma tuberculosis clear cell renal carcinoma cystic fibrosis heart disease lung cancer malignant mesothelioma osteosarcoma pancreatic intraductal papillary-mucinous carcinoma pilocytic astrocytoma breast carcinoma ductal breast carcinoma in situ interstitial cystitis lung carcinoma malignant pancreatic neoplasm ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia renal carcinoma subependymal giant cell astrocytoma glioblastoma invasive ductal breast carcinoma lung adenocarcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.