1G1Q | pdb_00001g1q

Crystal structure of P-selectin lectin/EGF domains


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd1g1qd1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like C-type lectin domain P-selectin, C-lectin domain human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd1g1qd2 Small proteins Knottins (small inhibitors, toxins, lectins) EGF/Laminin EGF-type module E-selectin, EGF-domain human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd1g1qd3 Artifacts Tags Tags Tags C-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd1g1qc1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like C-type lectin domain P-selectin, C-lectin domain human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd1g1qc2 Small proteins Knottins (small inhibitors, toxins, lectins) EGF/Laminin EGF-type module E-selectin, EGF-domain human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd1g1qc3 Artifacts Tags Tags Tags C-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd1g1qb1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like C-type lectin domain P-selectin, C-lectin domain human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd1g1qb2 Small proteins Knottins (small inhibitors, toxins, lectins) EGF/Laminin EGF-type module E-selectin, EGF-domain human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Bd1g1qb3 Artifacts Tags Tags Tags C-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad1g1qa1 Alpha and beta proteins (a+b) C-type lectin-like C-type lectin-like C-type lectin domain P-selectin, C-lectin domain human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad1g1qa2 Small proteins Knottins (small inhibitors, toxins, lectins) EGF/Laminin EGF-type module E-selectin, EGF-domain human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad1g1qa3 Artifacts Tags Tags Tags C-terminal Tags human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyC-type lectin-like 8035750 3001261 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyEGF/Laminin-like 8038328 3000412 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyEGF/Laminin-like 8038328 3000412 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyC-type lectin-like 8035750 3001261 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyEGF/Laminin-like 8038328 3000412 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyC-type lectin-like 8035750 3001261 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyEGF/Laminin-like 8038328 3000412 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyC-type lectin-like 8035750 3001261 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
De1g1qD1 A: C-terminal subdomain in Lon-related proteases catalytic domainsX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: Peptidase_C1F:ECOD (20:10:01)
De1g1qD2 A: C-terminal subdomain in Lon-related proteases catalytic domainsX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: EGF_CAF:ECOD (20:10:01)
Ce1g1qC1 A: C-terminal subdomain in Lon-related proteases catalytic domainsX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: Peptidase_C1F:ECOD (20:10:01)
Ce1g1qC2 A: C-terminal subdomain in Lon-related proteases catalytic domainsX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: EGF_CAF:ECOD (20:10:01)
Be1g1qB1 A: C-terminal subdomain in Lon-related proteases catalytic domainsX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: Peptidase_C1F:ECOD (20:10:01)
Be1g1qB2 A: C-terminal subdomain in Lon-related proteases catalytic domainsX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: EGF_CAF:ECOD (20:10:01)
Ae1g1qA1 A: C-terminal subdomain in Lon-related proteases catalytic domainsX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: Peptidase_C1F:ECOD (20:10:01)
Ae1g1qA2 A: C-terminal subdomain in Lon-related proteases catalytic domainsX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: EGF_CAF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)
D2.10.25.10 Mainly Beta Ribbon Laminin LamininCATH (4.3.0)
C3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)
C2.10.25.10 Mainly Beta Ribbon Laminin LamininCATH (4.3.0)
B3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)
B2.10.25.10 Mainly Beta Ribbon Laminin LamininCATH (4.3.0)
A3.10.100.10 Alpha Beta Roll Mannose-Binding Protein A Chain ACATH (4.3.0)
A2.10.25.10 Mainly Beta Ribbon Laminin LamininCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00059Lectin C-type domain (Lectin_C)Lectin C-type domainThis family includes both long and short form C-type Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
P-SELECTIN