1FV5 | pdb_00001fv5

SOLUTION STRUCTURE OF THE FIRST ZINC FINGER FROM THE DROSOPHILA U-SHAPED TRANSCRIPTION FACTOR

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1fv5a1	Small proteins	beta-beta-alpha zinc fingers	beta-beta-alpha zinc fingers	C2HC finger	U-shaped transcription factor, different fingers	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)
A	d1fv5a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	fruit fly (Drosophila melanogaster ) [TaxId: 7227 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	beta-beta-alpha zinc fingers	8033982	3001077	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e1fv5A1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: EGF_CA	F:	ECOD (20:10:01)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	FIRST ZINC FINGER OF U-SHAPED	transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding protein binding binding DNA-binding transcription factor binding transcription regulator activity DNA-binding transcription repressor activity DNA-binding transcription factor activity DNA binding nucleic acid binding cation binding transition metal ion binding zinc ion binding ion binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding protein binding binding DNA-binding transcription factor binding transcription regulator activity DNA-binding transcription repressor activity DNA-binding transcription factor activity DNA binding nucleic acid binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of DNA-templated transcription regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process developmental process heart development multicellular organism development multicellular organismal process anatomical structure development animal organ development circulatory system development system development cellular developmental process cell differentiation immune system development gland development cell development larval development lymph gland plasmatocyte differentiation hemocyte differentiation plasmatocyte differentiation larval lymph gland hemopoiesis post-embryonic development larval lymph gland hemocyte differentiation post-embryonic hemopoiesis hemopoiesis hematopoietic or lymphoid organ development immune system process lymph gland development regulation of developmental process negative regulation of hemocyte differentiation negative regulation of developmental process regulation of cell differentiation regulation of hemocyte differentiation negative regulation of immune system process negative regulation of cell differentiation regulation of immune system process regulation of multicellular organismal process homeostatic process tissue homeostasis embryo development amnioserosa maintenance embryonic development via the syncytial blastoderm multicellular organismal-level homeostasis embryo development ending in birth or egg hatching anatomical structure homeostasis anatomical structure morphogenesis embryonic morphogenesis germ-band shortening cellular response to stimulus cellular response to nitrogen compound response to stimulus negative regulation of signaling signaling response to peptide hormone regulation of signal transduction insulin receptor signaling pathway regulation of cellular response to insulin stimulus negative regulation of cell communication cell surface receptor protein tyrosine kinase signaling pathway cell communication cellular response to endogenous stimulus response to hormone signal transduction enzyme-linked receptor protein signaling pathway cellular response to hormone stimulus regulation of signaling cell surface receptor signaling pathway negative regulation of response to stimulus response to endogenous stimulus regulation of insulin receptor signaling pathway response to oxygen-containing compound cellular response to peptide hormone stimulus response to nitrogen compound negative regulation of signal transduction cellular response to oxygen-containing compound cellular response to chemical stimulus negative regulation of cellular response to insulin stimulus regulation of response to stimulus negative regulation of insulin receptor signaling pathway response to chemical response to insulin regulation of cell communication cellular response to insulin stimulus crystal cell differentiation lymph gland crystal cell differentiation chaeta development sensory organ development regulation of humoral immune response antibacterial peptide production regulation of immune effector process positive regulation of response to biotic stimulus positive regulation of macromolecule biosynthetic process response to biotic stimulus positive regulation of metabolic process antimicrobial humoral immune response mediated by antimicrobial peptide positive regulation of antimicrobial peptide biosynthetic process positive regulation of immune response response to bacterium positive regulation of macromolecule metabolic process positive regulation of immune system process positive regulation of antibacterial peptide biosynthetic process response to other organism immune response response to external stimulus immune effector process regulation of antimicrobial peptide biosynthetic process peptide biosynthetic process antibacterial peptide biosynthetic process defense response to other organism positive regulation of defense response positive regulation of production of molecular mediator of immune response regulation of immune response regulation of production of molecular mediator of immune response peptide metabolic process regulation of defense response humoral immune response regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms regulation of response to external stimulus positive regulation of biological process regulation of antibacterial peptide production antimicrobial humoral response positive regulation of response to stimulus defense response to bacterium positive regulation of defense response to bacterium positive regulation of antimicrobial peptide production positive regulation of humoral immune response positive regulation of response to external stimulus positive regulation of biosynthetic process antimicrobial peptide production response to stress regulation of response to stress positive regulation of immune effector process response to external biotic stimulus positive regulation of cellular process production of molecular mediator of immune response regulation of defense response to bacterium regulation of antimicrobial humoral response defense response defense response to symbiont antibacterial humoral response positive regulation of antimicrobial humoral response regulation of antimicrobial peptide production positive regulation of gene expression positive regulation of antibacterial peptide production antimicrobial peptide biosynthetic process regulation of antibacterial peptide biosynthetic process eye development visual system development compound eye development sensory system development transcription by RNA polymerase II regulation of transcription by RNA polymerase II negative regulation of transcription by RNA polymerase II positive regulation of DNA-templated transcription positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR013087	Zinc finger C2H2-type	Domain
A	IPR036236	Zinc finger C2H2 superfamily	Homologous Superfamily
A	IPR039746	FOG family	Family
A	IPR034731	Zinc finger CCHC FOG-type	Domain
A	IPR059059	Zinc finger protein 462-like, seventh C2H2 zinc finger	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.