1FOY
THE RNA BINDING DOMAIN OF RIBOSOMAL PROTEIN L11: THREE-DIMENSIONAL STRUCTURE OF THE RNA-BOUND FORM OF THE PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1foya_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | Ribosomal protein L11, C-terminal domain | Ribosomal protein L11, C-terminal domain | Ribosomal protein L11, C-terminal domain | (Geobacillus stearothermophilus ) [TaxId: 1422 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ribosomal protein L11 C-terminal domain | 8039481 | 3001186 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.250 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Ribosomal protein L11/L12, C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03946 | Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) | Ribosomal protein L11, N-terminal domain | The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. | Domain | |
PF00298 | Ribosomal protein L11, RNA binding domain (Ribosomal_L11) | Ribosomal protein L11, RNA binding domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR020785 | Large ribosomal subunit protein uL11, conserved site | Conserved Site | |
IPR020783 | Large ribosomal subunit protein uL11, C-terminal | Domain | |
IPR000911 | Ribosomal protein uL11 | Family | |
IPR006519 | Large ribosomal subunit protein uL11, bacterial-type | Family | |
IPR020784 | Large ribosomal subunit protein uL11, N-terminal | Domain | |
IPR036769 | Large ribosomal subunit protein uL11, C-terminal domain superfamily | Homologous Superfamily | |
IPR036796 | Large ribosomal subunit protein uL11, N-terminal domain superfamily | Homologous Superfamily |