1DZL
L1 protein of human papillomavirus 16
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1dzla_ | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Group I dsDNA viruses | Papovaviridae-like VP | Papillomavirus L1 protein | (Human papillomavirus 16 ) [TaxId: 333760 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00500 | e1dzlA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00500 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.175.20 | Mainly Beta | Sandwich | Polyomavirus Vp1 | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00500 | L1 (late) protein (Late_protein_L1) | L1 (late) protein | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036973 | Major capsid L1 (late) superfamily, Papillomavirus | Homologous Superfamily | |
IPR011222 | Double-stranded DNA virus, group I, capsid | Homologous Superfamily | |
IPR002210 | Major capsid L1 (late) protein, Papillomavirus | Family |