CRYSTAL STRUCTURE OF AN HDAC HOMOLOG COMPLEXED WITH TRICHOSTATIN A
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d1c3rb_ | Alpha and beta proteins (a/b) | Arginase/deacetylase | Arginase/deacetylase | Histone deacetylase, HDAC | HDAC homologue | (Aquifex aeolicus ) [TaxId: 63363 ], | SCOPe (2.08) |
| A | d1c3ra_ | Alpha and beta proteins (a/b) | Arginase/deacetylase | Arginase/deacetylase | Histone deacetylase, HDAC | HDAC homologue | (Aquifex aeolicus ) [TaxId: 63363 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | SNO | e1c3rB1 | A: alpha arrays | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: C-terminal subdomain in Lon-related proteases catalytic domains | F: SNO | ECOD (v295.2) |
| A | SNO | e1c3rA1 | A: alpha arrays | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: C-terminal subdomain in Lon-related proteases catalytic domains | F: SNO | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.800.20 | Alpha Beta | 3-Layer(aba) Sandwich | Arginase | Chain A | CATH (4.3.0) |
| A | 3.40.800.20 | Alpha Beta | 3-Layer(aba) Sandwich | Arginase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00850 | Histone deacetylase domain (Hist_deacetyl) | Histone deacetylase domain | Histones can be reversibly acetylated on several lysine residues. Regulation of transcription is caused in part by this mechanism. Histone deacetylases catalyse the removal of the acetyl group. Histone deacetylases are related to other proteins [1]. ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| HDLP (HISTONE DEACETYLASE-LIKE PROTEIN) | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR000286 | Histone deacetylase HDAC | Family | |
| IPR023696 | Ureohydrolase domain superfamily | Homologous Superfamily | |
| IPR023801 | Histone deacetylase domain | Domain | |
| IPR003085 | Acetoin utilization protein AcuC | Family | |
| IPR037138 | Histone deacetylase domain superfamily | Homologous Superfamily |














