1BXN
THE CRYSTAL STRUCTURE OF RUBISCO FROM ALCALIGENES EUTROPHUS TO 2.7 ANGSTROMS.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Ribulose 1 5-bisphosphate carboxylase-oxygenase | 8023068 | 4001311 | SCOP2 (2022-06-29) |
A | SCOP2 Family | RuBisCo large subunit C-terminal domain | 8031322 | 4003287 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | RuBisCO large subunit small (N-terminal) domain | 8035448 | 3001258 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | RuBisCo C-terminal domain | 8043700 | 3000552 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | RuBisCo C-terminal domain | 8043700 | 3000552 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | RuBisCO large subunit small (N-terminal) domain | 8035448 | 3001258 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | RuBisCO large subunit small (N-terminal) domain | 8035448 | 3001258 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | RuBisCo C-terminal domain | 8043700 | 3000552 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | RuBisCo C-terminal domain | 8043700 | 3000552 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | RuBisCO large subunit small (N-terminal) domain | 8035448 | 3001258 | SCOP2B (2022-06-29) |
D [auth J] | SCOP2B Superfamily | RuBisCO small subunit | 8035853 | 3001622 | SCOP2B (2022-06-29) |
F [auth K] | SCOP2B Superfamily | RuBisCO small subunit | 8035853 | 3001622 | SCOP2B (2022-06-29) |
H [auth L] | SCOP2B Superfamily | RuBisCO small subunit | 8035853 | 3001622 | SCOP2B (2022-06-29) |
B [auth I] | SCOP2 Family | RuBisCO small subunit | 8023473 | 4001455 | SCOP2 (2022-06-29) |
B [auth I] | SCOP2 Superfamily | RuBisCO small subunit | 8035853 | 3001622 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02788 | e1bxnA1 | A: a+b two layers | X: Alpha-beta plaits | H: RuBisCO, large subunit, small (N-terminal) domain (From Topology) | T: RuBisCO, large subunit, small (N-terminal) domain | F: PF02788 | ECOD (1.6) |
A | PF00016 | e1bxnA2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00016 | ECOD (1.6) |
C | PF02788 | e1bxnC1 | A: a+b two layers | X: Alpha-beta plaits | H: RuBisCO, large subunit, small (N-terminal) domain (From Topology) | T: RuBisCO, large subunit, small (N-terminal) domain | F: PF02788 | ECOD (1.6) |
C | PF00016 | e1bxnC2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00016 | ECOD (1.6) |
E | PF02788 | e1bxnE1 | A: a+b two layers | X: Alpha-beta plaits | H: RuBisCO, large subunit, small (N-terminal) domain (From Topology) | T: RuBisCO, large subunit, small (N-terminal) domain | F: PF02788 | ECOD (1.6) |
E | PF00016 | e1bxnE2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00016 | ECOD (1.6) |
G | PF02788 | e1bxnG1 | A: a+b two layers | X: Alpha-beta plaits | H: RuBisCO, large subunit, small (N-terminal) domain (From Topology) | T: RuBisCO, large subunit, small (N-terminal) domain | F: PF02788 | ECOD (1.6) |
G | PF00016 | e1bxnG2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF00016 | ECOD (1.6) |
D [auth J] | PF00101 | e1bxnJ1 | A: a+b two layers | X: Reverse ferredoxin | H: RuBisCO, small subunit (From Topology) | T: RuBisCO, small subunit | F: PF00101 | ECOD (1.6) |
F [auth K] | PF00101 | e1bxnK1 | A: a+b two layers | X: Reverse ferredoxin | H: RuBisCO, small subunit (From Topology) | T: RuBisCO, small subunit | F: PF00101 | ECOD (1.6) |
H [auth L] | PF00101 | e1bxnL1 | A: a+b two layers | X: Reverse ferredoxin | H: RuBisCO, small subunit (From Topology) | T: RuBisCO, small subunit | F: PF00101 | ECOD (1.6) |
B [auth I] | PF00101 | e1bxnI1 | A: a+b two layers | X: Reverse ferredoxin | H: RuBisCO, small subunit (From Topology) | T: RuBisCO, small subunit | F: PF00101 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02788 | Ribulose bisphosphate carboxylase large chain, N-terminal domain (RuBisCO_large_N) | Ribulose bisphosphate carboxylase large chain, N-terminal domain | The N-terminal domain of RuBisCO large chain adopts a ferredoxin-like fold. | Domain | |
PF00016 | Ribulose bisphosphate carboxylase large chain, catalytic domain (RuBisCO_large) | Ribulose bisphosphate carboxylase large chain, catalytic domain | The C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold. | Domain | |
B [auth I], D [auth J], F [auth K], H [auth L] | PF00101 | Ribulose bisphosphate carboxylase, small chain (RuBisCO_small) | Ribulose bisphosphate carboxylase, small chain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN) |
| - | ||
B [auth I], D [auth J], F [auth K], H [auth L] | PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN) |
| - |