Annotations: 1BCP

BINARY COMPLEX OF PERTUSSIS TOXIN AND ATP

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
L	d1bcpl_	All beta proteins	OB-fold	Bacterial enterotoxins	Bacterial AB5 toxins, B-subunits	Pertussis toxin S5 subunit	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
F	d1bcpf_	All beta proteins	OB-fold	Bacterial enterotoxins	Bacterial AB5 toxins, B-subunits	Pertussis toxin S5 subunit	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
K	d1bcpk_	All beta proteins	OB-fold	Bacterial enterotoxins	Bacterial AB5 toxins, B-subunits	Pertussis toxin S4 subunit	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
J	d1bcpj_	All beta proteins	OB-fold	Bacterial enterotoxins	Bacterial AB5 toxins, B-subunits	Pertussis toxin S4 subunit	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
E	d1bcpe_	All beta proteins	OB-fold	Bacterial enterotoxins	Bacterial AB5 toxins, B-subunits	Pertussis toxin S4 subunit	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
D	d1bcpd_	All beta proteins	OB-fold	Bacterial enterotoxins	Bacterial AB5 toxins, B-subunits	Pertussis toxin S4 subunit	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
I	d1bcpi1	All beta proteins	OB-fold	Bacterial enterotoxins	Bacterial AB5 toxins, B-subunits	Pertussis toxin S2/S3 subunits, C-terminal domain	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
I	d1bcpi2	Alpha and beta proteins (a+b)	C-type lectin-like	C-type lectin-like	Aerolysin/Pertussis toxin (APT) domain	Pertussis toxin, S2/S3 subunits, N-terminal domain	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
C	d1bcpc1	All beta proteins	OB-fold	Bacterial enterotoxins	Bacterial AB5 toxins, B-subunits	Pertussis toxin S2/S3 subunits, C-terminal domain	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
C	d1bcpc2	Alpha and beta proteins (a+b)	C-type lectin-like	C-type lectin-like	Aerolysin/Pertussis toxin (APT) domain	Pertussis toxin, S2/S3 subunits, N-terminal domain	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
H	d1bcph1	All beta proteins	OB-fold	Bacterial enterotoxins	Bacterial AB5 toxins, B-subunits	Pertussis toxin S2/S3 subunits, C-terminal domain	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
H	d1bcph2	Alpha and beta proteins (a+b)	C-type lectin-like	C-type lectin-like	Aerolysin/Pertussis toxin (APT) domain	Pertussis toxin, S2/S3 subunits, N-terminal domain	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
B	d1bcpb1	All beta proteins	OB-fold	Bacterial enterotoxins	Bacterial AB5 toxins, B-subunits	Pertussis toxin S2/S3 subunits, C-terminal domain	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
B	d1bcpb2	Alpha and beta proteins (a+b)	C-type lectin-like	C-type lectin-like	Aerolysin/Pertussis toxin (APT) domain	Pertussis toxin, S2/S3 subunits, N-terminal domain	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
G	d1bcpg_	Alpha and beta proteins (a+b)	ADP-ribosylation	ADP-ribosylation	ADP-ribosylating toxins	Pertussis toxin, S1 subunit	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)
A	d1bcpa_	Alpha and beta proteins (a+b)	ADP-ribosylation	ADP-ribosylation	ADP-ribosylating toxins	Pertussis toxin, S1 subunit	(Bordetella pertussis ) [TaxId: 520 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
L	SCOP2B Superfamily	Bacterial enterotoxins	8041863	3000434	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Bacterial enterotoxins	8041863	3000434	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Bacterial enterotoxins	8041862	3000434	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Bacterial enterotoxins	8041862	3000434	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Bacterial enterotoxins	8041862	3000434	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Bacterial enterotoxins	8041862	3000434	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Bacterial enterotoxins	8041854	3000434	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	C-type lectin-like	8037123	3001261	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	C-type lectin-like	8037123	3001261	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Bacterial enterotoxins	8041854	3000434	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	ADP-ribosylation	8037004	3001208	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	ADP-ribosylation	8037004	3001208	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	Stap_Strp_toxin	e1bcpL1	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Stap_Strp_toxin	ECOD (v295)
F	Stap_Strp_toxin	e1bcpF1	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Stap_Strp_toxin	ECOD (v295)
K	Stap_Strp_toxin	e1bcpK1	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Stap_Strp_toxin	ECOD (v295)
J	Stap_Strp_toxin	e1bcpJ1	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Stap_Strp_toxin	ECOD (v295)
E	Stap_Strp_toxin	e1bcpE1	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Stap_Strp_toxin	ECOD (v295)
D	Stap_Strp_toxin	e1bcpD1	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Stap_Strp_toxin	ECOD (v295)
I	Stap_Strp_toxin	e1bcpI1	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Stap_Strp_toxin	ECOD (v295)
I	FGE-sulfatase	e1bcpI2	A: alpha arrays	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: FGE-sulfatase	ECOD (v295)
C	Stap_Strp_toxin	e1bcpC1	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Stap_Strp_toxin	ECOD (v295)
C	FGE-sulfatase	e1bcpC2	A: alpha arrays	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: FGE-sulfatase	ECOD (v295)
H	Stap_Strp_toxin	e1bcpH1	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Stap_Strp_toxin	ECOD (v295)
H	FGE-sulfatase	e1bcpH2	A: alpha arrays	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: FGE-sulfatase	ECOD (v295)
B	Stap_Strp_toxin	e1bcpB1	A: alpha arrays	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Stap_Strp_toxin	ECOD (v295)
B	FGE-sulfatase	e1bcpB2	A: alpha arrays	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: FGE-sulfatase	ECOD (v295)
G	Met_synt_B12	e1bcpG1	A: alpha arrays	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: Met_synt_B12	ECOD (v295)
A	Met_synt_B12	e1bcpA1	A: alpha arrays	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: Met_synt_B12	ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
L	2.40.50.110	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)		CATH (4.3.0)
F	2.40.50.110	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)		CATH (4.3.0)
K	2.40.50.110	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)		CATH (4.3.0)
J	2.40.50.110	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)		CATH (4.3.0)
E	2.40.50.110	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)		CATH (4.3.0)
D	2.40.50.110	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)		CATH (4.3.0)
I	3.10.40.10	Alpha Beta	Roll	Pertussis Toxin	Chain B, domain 1	CATH (4.3.0)
I	2.40.50.110	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)		CATH (4.3.0)
C	3.10.40.10	Alpha Beta	Roll	Pertussis Toxin	Chain B, domain 1	CATH (4.3.0)
C	2.40.50.110	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)		CATH (4.3.0)
H	3.10.40.10	Alpha Beta	Roll	Pertussis Toxin	Chain B, domain 1	CATH (4.3.0)
H	2.40.50.110	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)		CATH (4.3.0)
B	3.10.40.10	Alpha Beta	Roll	Pertussis Toxin	Chain B, domain 1	CATH (4.3.0)
B	2.40.50.110	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)		CATH (4.3.0)
G	3.90.210.10	Alpha Beta	Alpha-Beta Complex	Heat-Labile Enterotoxin	Chain A	CATH (4.3.0)
A	3.90.210.10	Alpha Beta	Alpha-Beta Complex	Heat-Labile Enterotoxin	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
F, L	PF09276	Pertussis toxin S5 subunit (Pertus-S5-tox)	Pertussis toxin S5 subunit	Members of this family of Bordetella pertussis toxins adopt a structure consisting of an OB fold, with a closed or partly opened beta-barrel in a Greek-key topology [1].	Domain
D, E, J, K	PF09275	Pertussis toxin S4 subunit (Pertus-S4-tox)	Pertussis toxin S4 subunit	Members of this family of Bordetella pertussis toxins adopt a structure consisting of an OB fold, with a closed or partly opened beta-barrel in a Greek-key topology [1].	Domain
C, I	PF02918	Pertussis toxin, subunit 2 and 3, C-terminal domain (Pertussis_S2S3)	Pertussis toxin, subunit 2 and 3, C-terminal domain		Domain
B, H	PF03440	Aerolysin/Pertussis toxin (APT) domain (APT)	Aerolysin/Pertussis toxin (APT) domain	This family represents the N-terminal domain of aerolysin and pertussis toxin and has a type-C lectin like fold.	Domain
B, H	PF02918	Pertussis toxin, subunit 2 and 3, C-terminal domain (Pertussis_S2S3)	Pertussis toxin, subunit 2 and 3, C-terminal domain		Domain
A, G	PF02917	Pertussis toxin, subunit 1 (Pertussis_S1)	Pertussis toxin, subunit 1		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
F, L	PERTUSSIS TOXIN	toxin activity	-	host cell plasma membrane host cellular component cellular anatomical structure host cell part host cell membrane other organism part extracellular region
D, E, J, K	PERTUSSIS TOXIN	toxin activity	-	host cell plasma membrane host cellular component cellular anatomical structure host cell part host cell membrane other organism part extracellular region
C, I	PERTUSSIS TOXIN	toxin activity	-	host cell plasma membrane host cellular component cellular anatomical structure host cell part host cell membrane other organism part extracellular region
B, H	PERTUSSIS TOXIN	toxin activity	symbiont-mediated activation of host MAPK cascade symbiont-mediated perturbation of host MAPK cascade symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated activation of host signal transduction pathway symbiont-mediated perturbation of host signal transduction pathway modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction	host cell plasma membrane host cellular component cellular anatomical structure host cell part host cell membrane other organism part extracellular region
A, G	PERTUSSIS TOXIN	pentosyltransferase activity NAD+ poly-ADP-ribosyltransferase activity glycosyltransferase activity transferase activity catalytic activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups toxin activity	symbiont-mediated activation of host G protein-coupled receptor signal transduction symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms symbiont-mediated activation of host signal transduction pathway biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated perturbation of host process symbiont-mediated perturbation of host G protein-coupled receptor signal transduction pathway symbiont-mediated perturbation of host signal transduction pathway symbiont-mediated perturbation of host receptor-mediated signal transduction modulation of process of another organism	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
F, L	IPR015356	Pertussis toxin, subunit S5	Family
F, L	IPR008992	Enterotoxin	Homologous Superfamily
D, E, J, K	IPR015355	Pertussis toxin, subunit S4	Family
D, E, J, K	IPR008992	Enterotoxin	Homologous Superfamily
C, I	IPR005138	Aerolysin/Pertussis toxin domain	Domain
C, I	IPR016187	C-type lectin fold	Homologous Superfamily
C, I	IPR037015	Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily	Homologous Superfamily
C, I	IPR008992	Enterotoxin	Homologous Superfamily
C, I	IPR003899	Bordetella pertussis toxin B	Family
C, I	IPR020063	Bordetella pertussis toxin B, subunit 2/3, C-terminal	Domain
B, H	IPR005138	Aerolysin/Pertussis toxin domain	Domain
B, H	IPR016187	C-type lectin fold	Homologous Superfamily
B, H	IPR037015	Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily	Homologous Superfamily
B, H	IPR008992	Enterotoxin	Homologous Superfamily
B, H	IPR003899	Bordetella pertussis toxin B	Family
B, H	IPR020063	Bordetella pertussis toxin B, subunit 2/3, C-terminal	Domain
A, G	IPR003898	Pertussis toxin-like	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.