11JJ | pdb_000011jj

Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth L3]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
HC [auth 23]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
EC [auth A]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
H [auth L8]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
H [auth L8]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
AC [auth L9]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
ZB [auth 11]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
ZB [auth 11]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
XB [auth GG]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
WB [auth W]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
UB [auth WX]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
TB [auth RS]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
SB [auth S3]PF07650KH domain (KH_2)KH domainDomain
SB [auth S3]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
RB [auth YY]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
QB [auth S7]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
PB [auth S9]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
PB [auth S9]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
OB [auth S4]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
OB [auth S4]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
OB [auth S4]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
OB [auth S4]PF00467KOW motif (KOW)KOW motif- Family
NB [auth S6]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
MB [auth SS]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
LB [auth RR]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
KB [auth XX]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
JB [auth LL]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
HB [auth OO]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
GB [auth AA]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
FB [auth CC]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
FB [auth CC]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
FB [auth CC]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
EB [auth II]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
DB [auth WW]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28eDomain
CB [auth S5]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
BB [auth TT]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
AB [auth EE]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
AB [auth EE]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
ZA [auth ZZ]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
XA [auth F]PF00557Metallopeptidase family M24 (Peptidase_M24)Metallopeptidase family M24This family contains metallopeptidases. It also contains non-peptidase homologues such as the N terminal domain of Spt16 which is a histone H3-H4 binding module [3]. Domain
E [auth DD]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
E [auth DD]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
E [auth DD]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
UA [auth VV]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
TA [auth FF]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1]. Domain
TA [auth FF]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
TA [auth FF]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
SA [auth AS]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
PA [auth 42]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
OA [auth 41]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
NA [auth 40]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e familyBovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2]. Domain
MA [auth 39]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
KA [auth 37]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
JA [auth 36]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
IA [auth 35]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
HA [auth 34]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
EA [auth 31]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
DA [auth 30]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
C [auth S2]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
C [auth S2]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
CA [auth 29]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
AA [auth 27]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein familyThe N-terminal region of the eukaryotic ribosomal L27 has the KOW motif. C-terminal region is represented by this family. Domain
AA [auth 27]PF00467KOW motif (KOW)KOW motif- Family
Z [auth 26]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
Z [auth 26]PF00467KOW motif (KOW)KOW motif- Family
W [auth 21]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
T [auth 17]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
B [auth BB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
B [auth BB]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
R [auth 15]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
Q [auth 14]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
O [auth 10]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
M [auth L7]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. Domain
M [auth L7]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
L [auth L6]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
K [auth L5]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
K [auth L5]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
J [auth L4]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
J [auth L4]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth L3]60S ribosomal protein L3
HC [auth 23]Large ribosomal subunit protein uL14
GC [auth 28]28S rRNA---
FC [auth ES]ES27L---
EC [auth A]Small ribosomal subunit protein uS19
DC [auth LA]LARP1---
CC [auth v]Elongation factor 2---
BC [auth 18]18S rRNA---
H [auth L8]60S ribosomal protein L8
AC [auth L9]60S ribosomal protein L9
ZB [auth 11]60S ribosomal protein L11
YB [auth UU]eS26---
XB [auth GG]Small ribosomal subunit protein uS11
WB [auth W]Ribosomal protein L24
VB [auth S8]40S ribosomal protein S8---
UB [auth WX]40S ribosomal protein S15a
TB [auth RS]40S ribosomal protein S17
SB [auth S3]Small ribosomal subunit protein uS3
RB [auth YY]40S ribosomal protein S30
G [auth 6]5S rRNA---
QB [auth S7]Small ribosomal subunit protein eS7
PB [auth S9]40S ribosomal protein S9
OB [auth S4]40S ribosomal protein S4
NB [auth S6]40S ribosomal protein S6
MB [auth SS]40S ribosomal protein S24
LB [auth RR]40S ribosomal protein S23
KB [auth XX]40S ribosomal protein S29
JB [auth LL]40S ribosomal protein S18
IB [auth MM]Small ribosomal subunit protein eS19---
HB [auth OO]40S ribosomal protein S20
F [auth 58]5.8S rRNA---
GB [auth AA]Receptor of activated protein C kinase 1
FB [auth CC]40S ribosomal protein S10 -
EB [auth II]Small ribosomal subunit protein uS9
DB [auth WW]40S ribosomal protein S28
CB [auth S5]Small ribosomal subunit protein uS7
BB [auth TT]40S ribosomal protein S25
AB [auth EE]40S ribosomal protein S12
ZA [auth ZZ]40S ribosomal protein S27a
YA [auth Q]Large ribosomal subunit protein eL18---
XA [auth F]Proliferation-associated protein 2G4
E [auth DD]Small ribosomal subunit protein uS17
WA [auth t]uL11
VA [auth s]60S acidic ribosomal protein P0
UA [auth VV]40S ribosomal protein S27
TA [auth FF]40S ribosomal protein S13
SA [auth AS]40S ribosomal protein S3a
RA [auth gg]60S ribosomal protein L28
QA [auth ff]60S ribosomal protein L37a
PA [auth 42]eL42
OA [auth 41]eL41
NA [auth 40]Large ribosomal subunit protein eL40
D [auth PP]eS21---
MA [auth 39]60S ribosomal protein L39
LA [auth 38]Large ribosomal subunit protein eL38---
KA [auth 37]60S ribosomal protein L37
JA [auth 36]60S ribosomal protein L36
IA [auth 35]60S ribosomal protein L35
HA [auth 34]60S ribosomal protein L34
GA [auth ee]Large ribosomal subunit protein eL33
FA [auth 32]Large ribosomal subunit protein eL32---
EA [auth 31]60S ribosomal protein L31
DA [auth 30]60S ribosomal protein L30
C [auth S2]40S ribosomal protein S2
CA [auth 29]Large ribosomal subunit protein eL29
BA [auth dd]60S ribosomal protein L27a
AA [auth 27]60S ribosomal protein L27
Z [auth 26]60S ribosomal protein L26
Y [auth cc]Large ribosomal subunit protein uL23
X [auth 22]Large ribosomal subunit protein eL22---
W [auth 21]60S ribosomal protein L21
V [auth 20]Large ribosomal subunit protein eL20---
U [auth 19]60S ribosomal protein L19---
T [auth 17]60S ribosomal protein L17
B [auth BB]40S_SA_C domain-containing protein
S [auth bb]Large ribosomal subunit protein uL13
R [auth 15]60S ribosomal protein L15
Q [auth 14]60S ribosomal protein L14
P [auth 13]Large ribosomal subunit protein eL13---
O [auth 10]Ribosomal protein L10
N [auth aa]Large ribosomal subunit protein eL8---
M [auth L7]60S ribosomal protein L7
L [auth L6]60S ribosomal protein L6
K [auth L5]60S ribosomal protein L5
J [auth L4]60S ribosomal protein L4
A [auth IF]IFRD2---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth L3]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
I [auth L3]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
I [auth L3]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
I [auth L3]IPR000597Large ribosomal subunit protein uL3Family
I [auth L3]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
HC [auth 23]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
HC [auth 23]IPR000218Large ribosomal subunit protein uL14Family
HC [auth 23]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
EC [auth A]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
EC [auth A]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
EC [auth A]IPR002222Small ribosomal subunit protein uS19Family
EC [auth A]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
H [auth L8]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
H [auth L8]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
H [auth L8]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth L8]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth L8]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
H [auth L8]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
H [auth L8]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
H [auth L8]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
H [auth L8]IPR002171Large ribosomal subunit protein uL2Family
AC [auth L9]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
AC [auth L9]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
AC [auth L9]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
AC [auth L9]IPR000702Large ribosomal subunit protein uL6-likeFamily
ZB [auth 11]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
ZB [auth 11]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
ZB [auth 11]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
ZB [auth 11]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
ZB [auth 11]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
ZB [auth 11]IPR002132Large ribosomal subunit protein uL5Family
XB [auth GG]IPR001971Small ribosomal subunit protein uS11Family
XB [auth GG]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
XB [auth GG]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
WB [auth W]IPR011017TRASH domainDomain
WB [auth W]IPR056366Large ribosomal subunit protein eL24Family
WB [auth W]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
WB [auth W]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
WB [auth W]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
UB [auth WX]IPR000630Small ribosomal subunit protein uS8Family
UB [auth WX]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
UB [auth WX]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
TB [auth RS]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
TB [auth RS]IPR001210Small ribosomal subunit protein eS17Family
TB [auth RS]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
SB [auth S3]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
SB [auth S3]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
SB [auth S3]IPR057258Small ribosomal subunit protein uS3Family
SB [auth S3]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
SB [auth S3]IPR004044K Homology domain, type 2Domain
SB [auth S3]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
SB [auth S3]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
SB [auth S3]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
RB [auth YY]IPR039415Ubiquitin-like protein FUBIDomain
RB [auth YY]IPR019956Ubiquitin domainDomain
RB [auth YY]IPR019954Ubiquitin conserved siteConserved Site
RB [auth YY]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
RB [auth YY]IPR000626Ubiquitin-like domainDomain
RB [auth YY]IPR006846Small ribosomal subunit protein eS30Family
QB [auth S7]IPR000554Small ribosomal subunit protein eS7Family
QB [auth S7]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
PB [auth S9]IPR002942RNA-binding S4 domainDomain
PB [auth S9]IPR022801Small ribosomal subunit protein uS4Family
PB [auth S9]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
PB [auth S9]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
PB [auth S9]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
PB [auth S9]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
OB [auth S4]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
OB [auth S4]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
OB [auth S4]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
OB [auth S4]IPR002942RNA-binding S4 domainDomain
OB [auth S4]IPR013845Small ribosomal subunit protein eS4, central regionDomain
OB [auth S4]IPR000876Small ribosomal subunit protein eS4Family
OB [auth S4]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
OB [auth S4]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
OB [auth S4]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
OB [auth S4]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
OB [auth S4]IPR005824KOWDomain
NB [auth S6]IPR014401Small ribosomal subunit protein eS6-likeFamily
NB [auth S6]IPR001377Small ribosomal subunit protein eS6Family
NB [auth S6]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
MB [auth SS]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
MB [auth SS]IPR001976Small ribosomal subunit protein eS24Family
MB [auth SS]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
MB [auth SS]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
LB [auth RR]IPR006032Small ribosomal subunit protein uS12Family
LB [auth RR]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
LB [auth RR]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
KB [auth XX]IPR001209Small ribosomal subunit protein uS14Family
KB [auth XX]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
KB [auth XX]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
KB [auth XX]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
JB [auth LL]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
JB [auth LL]IPR001892Small ribosomal subunit protein uS13Family
JB [auth LL]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
JB [auth LL]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
HB [auth OO]IPR001848Small ribosomal subunit protein uS10Family
HB [auth OO]IPR027486Small ribosomal subunit protein uS10 domainDomain
HB [auth OO]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
HB [auth OO]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
HB [auth OO]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
GB [auth AA]IPR019775WD40 repeat, conserved siteConserved Site
GB [auth AA]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
GB [auth AA]IPR045223Small ribosomal subunit protein RACK1-likeFamily
GB [auth AA]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
GB [auth AA]IPR001680WD40 repeatRepeat
GB [auth AA]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
FB [auth CC]IPR037447Small ribosomal subunit protein eS10Family
FB [auth CC]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
FB [auth CC]IPR005326Plectin/eS10, N-terminalDomain
EB [auth II]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
EB [auth II]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
EB [auth II]IPR000754Small ribosomal subunit protein uS9Family
EB [auth II]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
DB [auth WW]IPR028626Ribosomal protein eS28 conserved siteConserved Site
DB [auth WW]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
DB [auth WW]IPR000289Small ribosomal subunit protein eS28Family
CB [auth S5]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
CB [auth S5]IPR000235Small ribosomal subunit protein uS7Family
CB [auth S5]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
CB [auth S5]IPR023798Small ribosomal subunit protein uS7 domainDomain
CB [auth S5]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
BB [auth TT]IPR004977Small ribosomal subunit protein eS25Family
BB [auth TT]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
AB [auth EE]IPR000530Small ribosomal subunit protein eS12Family
AB [auth EE]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
AB [auth EE]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
AB [auth EE]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
ZA [auth ZZ]IPR019954Ubiquitin conserved siteConserved Site
ZA [auth ZZ]IPR000626Ubiquitin-like domainDomain
ZA [auth ZZ]IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
ZA [auth ZZ]IPR002906Small ribosomal subunit protein eS31Domain
ZA [auth ZZ]IPR019956Ubiquitin domainDomain
ZA [auth ZZ]IPR050158Ubiquitin and ubiquitin-likeFamily
ZA [auth ZZ]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
ZA [auth ZZ]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XA [auth F]IPR047113Proliferation-associated protein 2G4/ARX1Family
XA [auth F]IPR018349Peptidase M24A, methionine aminopeptidase, subfamily 2, binding siteBinding Site
XA [auth F]IPR036005Creatinase/aminopeptidase-likeHomologous Superfamily
XA [auth F]IPR000994Peptidase M24Domain
XA [auth F]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
XA [auth F]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
XA [auth F]IPR004545PA2G4 familyFamily
E [auth DD]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
E [auth DD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth DD]IPR000266Small ribosomal subunit protein uS17Family
E [auth DD]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
E [auth DD]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
WA [auth t]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
WA [auth t]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
WA [auth t]IPR000911Ribosomal protein uL11Family
WA [auth t]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
WA [auth t]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
WA [auth t]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
VA [auth s]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
VA [auth s]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
VA [auth s]IPR030670Large ribosomal subunit protein uL10, eukaryotaFamily
VA [auth s]IPR001790Large ribosomal subunit protein uL10, N-terminalDomain
VA [auth s]IPR050323Universal ribosomal protein uL10Family
VA [auth s]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
UA [auth VV]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
UA [auth VV]IPR000592Small ribosomal subunit protein eS27Family
UA [auth VV]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
TA [auth FF]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
TA [auth FF]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
TA [auth FF]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
TA [auth FF]IPR000589Small ribosomal subunit protein uS15Family
SA [auth AS]IPR001593Small ribosomal subunit protein eS1Family
SA [auth AS]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
SA [auth AS]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
RA [auth gg]IPR029004Ribosomal eL28/Mak16Domain
RA [auth gg]IPR002672Large ribosomal subunit protein eL28Family
QA [auth ff]IPR002674Large ribosomal subunit protein eL43Family
QA [auth ff]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QA [auth ff]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
PA [auth 42]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
PA [auth 42]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
PA [auth 42]IPR000552Large ribosomal subunit protein eL42Family
OA [auth 41]IPR007836Large ribosomal subunit protein eS32Family
NA [auth 40]IPR019956Ubiquitin domainDomain
NA [auth 40]IPR019954Ubiquitin conserved siteConserved Site
NA [auth 40]IPR050158Ubiquitin and ubiquitin-likeFamily
NA [auth 40]IPR001975Large ribosomal subunit protein eL40 domainDomain
NA [auth 40]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
NA [auth 40]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
NA [auth 40]IPR000626Ubiquitin-like domainDomain
MA [auth 39]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
MA [auth 39]IPR000077Large ribosomal subunit protein eL39Family
MA [auth 39]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
KA [auth 37]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
KA [auth 37]IPR001569Large ribosomal subunit protein eL37Family
KA [auth 37]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
KA [auth 37]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
JA [auth 36]IPR000509Large ribosomal subunit protein eL36Family
JA [auth 36]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
IA [auth 35]IPR001854Large ribosomal subunit protein uL29Family
IA [auth 35]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
IA [auth 35]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
IA [auth 35]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
HA [auth 34]IPR008195Large ribosomal subunit protein eL34Family
HA [auth 34]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
HA [auth 34]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
GA [auth ee]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
GA [auth ee]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
GA [auth ee]IPR001780Large ribosomal subunit protein eL33Family
GA [auth ee]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
EA [auth 31]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
EA [auth 31]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
EA [auth 31]IPR000054Large ribosomal subunit protein eL31Family
DA [auth 30]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
DA [auth 30]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
DA [auth 30]IPR000231Large ribosomal subunit protein eL30Family
DA [auth 30]IPR039109Large ribosomal subunit protein eL30-likeFamily
DA [auth 30]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
C [auth S2]IPR005711Small ribosomal subunit protein uS5, eukaryota_archaeaFamily
C [auth S2]IPR000851Small ribosomal subunit protein uS5Family
C [auth S2]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
C [auth S2]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
C [auth S2]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
C [auth S2]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
C [auth S2]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
CA [auth 29]IPR002673Large ribosomal subunit protein eL29Family
BA [auth dd]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
BA [auth dd]IPR021131Large ribosomal subunit protein uL15/eL18Domain
BA [auth dd]IPR030878Large ribosomal subunit protein uL15Family
BA [auth dd]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
BA [auth dd]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
AA [auth 27]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
AA [auth 27]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
AA [auth 27]IPR005824KOWDomain
AA [auth 27]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth 27]IPR001141Large ribosomal subunit protein eL27Family
AA [auth 27]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
Z [auth 26]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
Z [auth 26]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
Z [auth 26]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Z [auth 26]IPR005824KOWDomain
Z [auth 26]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Z [auth 26]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
Y [auth cc]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Y [auth cc]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
Y [auth cc]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
Y [auth cc]IPR019985Large ribosomal subunit protein uL23Family
Y [auth cc]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
Y [auth cc]IPR013025Large ribosomal subunit protein uL23-likeFamily
W [auth 21]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
W [auth 21]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
W [auth 21]IPR001147Large ribosomal subunit protein eL21Family
W [auth 21]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth 17]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
T [auth 17]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
T [auth 17]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
T [auth 17]IPR001063Large ribosomal subunit protein uL22Family
T [auth 17]IPR057265Large ribosomal subunit protein uL22, archaeaFamily
B [auth BB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth BB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth BB]IPR001865Small ribosomal subunit protein uS2Family
B [auth BB]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
B [auth BB]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
B [auth BB]IPR027498Small ribosomal subunit protein uS2, eukaryotaFamily
S [auth bb]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
S [auth bb]IPR005822Large ribosomal subunit protein uL13Family
S [auth bb]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
S [auth bb]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
R [auth 15]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
R [auth 15]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
R [auth 15]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
R [auth 15]IPR000439Large ribosomal subunit protein eL15Family
Q [auth 14]IPR039660Large ribosomal subunit protein eL14Family
Q [auth 14]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Q [auth 14]IPR002784Large ribosomal subunit protein eL14 domainDomain
Q [auth 14]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
O [auth 10]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
O [auth 10]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
O [auth 10]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
O [auth 10]IPR016180Large ribosomal subunit protein uL16 domainDomain
O [auth 10]IPR047873Large ribosomal subunit protein uL16Family
M [auth L7]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
M [auth L7]IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
M [auth L7]IPR039699Large ribosomal subunit protein uL30Family
M [auth L7]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
M [auth L7]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
M [auth L7]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
M [auth L7]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
L [auth L6]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
L [auth L6]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
L [auth L6]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth L6]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
L [auth L6]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
L [auth L6]IPR000915Large ribosomal subunit protein eL6Family
K [auth L5]IPR057268Large ribosomal subunit protein uL18Family
K [auth L5]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
K [auth L5]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
J [auth L4]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
J [auth L4]IPR002136Large ribosomal subunit protein uL4Family
J [auth L4]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
J [auth L4]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
J [auth L4]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
CC [auth v]DDE Parent Component: HIS

AA0040

:  2'-[3-carboxamido-3-(trimethylammonio)propyl]-L-histidine MOD:00049