6GED | pdb_00006ged

Adhesin domain of PrgB from Enterococcus faecalis bound to DNA

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACBSe6gedA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: CBS-domainT: CBS-domainF: CBSECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.530.10 Mainly Beta Sandwich Major cell-surface adhesin PAc Major cell-surface adhesin PAcCATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth D]DNA (5'-D(P*CP*GP*GP*GP*CP*CP*GP*CP*CP*C)-3')---
B [auth C]DNA (5'-D(P*GP*GP*GP*CP*GP*GP*CP*CP*CP*G)-3')---
PrgB - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR013574Glucan-binding protein C/Surface antigen I/II, V-domainDomain
IPR022263KxYKxGKxW signal peptideConserved Site
IPR041324Antigen I/II, N-terminalDomain
IPR032300Cell surface antigen, C-terminalDomain
IPR036234Glucan-binding protein C/Surface antigen I/II, V-domain superfamilyHomologous Superfamily
IPR026345Adhesin isopeptide-forming adherence domainDomain
IPR019931LPXTG cell wall anchor motifConserved Site