4HEL | pdb_00004hel

Crystal structure analysis of apo-GroEL structure


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeptidase_C14e4helA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)
BPeptidase_C14e4helB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)
CPeptidase_C14e4helC1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)
DPeptidase_C14e4helD1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)
EPeptidase_C14e4helE1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)
FPeptidase_C14e4helF1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)
GPeptidase_C14e4helG1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)
HPeptidase_C14e4helH1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)
IPeptidase_C14e4helI1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)
JPeptidase_C14e4helJ1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)
KPeptidase_C14e4helK1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)
LPeptidase_C14e4helL1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)
MPeptidase_C14e4helM1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)
NPeptidase_C14e4helN1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Peptidase_C14ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
A3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
A3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
B1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
B3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
B3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
C1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
C3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
C3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
D1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
D3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
D3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
E1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
E3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
E3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
F1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
F3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
F3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
G1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
G3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
G3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
H1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
H3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
H3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
I1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
I3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
I3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
J1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
J3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
J3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
K1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
K3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
K3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
L1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
L3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
L3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
M1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
M3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
M3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)
N1.10.560.10 Mainly Alpha Orthogonal Bundle GROEL domain 1CATH (4.3.0)
N3.30.260.10 Alpha Beta 2-Layer Sandwich GROEL domain 2CATH (4.3.0)
N3.50.7.10 Alpha Beta 3-Layer(bba) Sandwich GroEL GroELCATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR027413GroEL-like equatorial domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR027410TCP-1-like chaperonin intermediate domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR001844Chaperonin Cpn60/GroELFamily
A, B, C, D, E
IPR018370Chaperonin Cpn60, conserved siteConserved Site
A, B, C, D, E
IPR027409GroEL-like apical domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR002423Chaperonin Cpn60/GroEL/TCP-1 familyFamily