4ETQ
Vaccinia virus D8L IMV envelope protein in complex with Fab of murine IgG2a LA5
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E [auth X] | SCOP2B Superfamily | Carbonic anhydrase | 8065133 | 3001672 | SCOP2B (2022-06-29) |
F [auth C] | SCOP2B Superfamily | Carbonic anhydrase | 8065133 | 3001672 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth L] | C1-set_4 | e4etqL2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
B [auth L] | V-set | e4etqL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
D [auth B] | C1-set_4 | e4etqB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
D [auth B] | V-set | e4etqB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
E [auth X] | Carb_anhydrase | e4etqX1 | A: beta meanders | X: Carbonic anhydrase (From Topology) | H: Carbonic anhydrase (From Topology) | T: Carbonic anhydrase | F: Carb_anhydrase | ECOD (1.6) |
F [auth C] | Carb_anhydrase | e4etqC1 | A: beta meanders | X: Carbonic anhydrase (From Topology) | H: Carbonic anhydrase (From Topology) | T: Carbonic anhydrase | F: Carb_anhydrase | ECOD (1.6) |
A [auth H] | V-set_8 | e4etqH2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
A [auth H] | C1-set_1 | e4etqH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
C [auth A] | V-set_8 | e4etqA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
C [auth A] | C1-set_1 | e4etqA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D [auth B] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
E [auth X] | 3.10.200.10 | Alpha Beta | Roll | Carbonic Anhydrase II | Alpha carbonic anhydrase | CATH (4.3.0) |
F [auth C] | 3.10.200.10 | Alpha Beta | Roll | Carbonic Anhydrase II | Alpha carbonic anhydrase | CATH (4.3.0) |
A [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C [auth A] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
B [auth L], D [auth B] | ANTI-VACCINIA D8L ANTIGEN MURINE MONOCLONAL IGG2A ANTIBODY LA5 | L-KAPPA | Mus musculus (house mouse) | IGKV4-55*01, IGKJ5*01, IGKC*01, IGKC*02 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | (L-KAPPA_VH-VH-CH1) | IMGT (202436-0) |
A [auth H], C [auth A] | ANTI-VACCINIA D8L ANTIGEN MURINE MONOCLONAL IGG2A ANTIBODY LA5 | VH-CH1 | Mus musculus (house mouse) | IGHV1S126*01, IGHV1S127*01, IGHJ1*01, IGHJ1*02, IGHG2A*01, IGHG2A*02 | V-DOMAIN VH, C-DOMAIN CH1 | IG | (L-KAPPA_VH-VH-CH1) | IMGT (202436-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
B [auth L], D [auth B] | Light Chain | IGKV4 | Kappa | imv membrane protein | SAbDab (2024-09-13) |
A [auth H], C [auth A] | Heavy Chain | IGHV1 | - | imv membrane protein | SAbDab (2024-09-13) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
E [auth X], F [auth C] | PF00194 | Eukaryotic-type carbonic anhydrase (Carb_anhydrase) | Eukaryotic-type carbonic anhydrase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
B [auth L], D [auth B] | anti-vaccinia D8L antigen murine monoclonal IgG2a antibody LA5, light chain | - | - | - |
E [auth X], F [auth C] | IMV membrane protein | |||
A [auth H], C [auth A] | anti-vaccinia D8L antigen murine monoclonal IgG2a antibody LA5, heavy chain | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
E [auth X], F [auth C] | IPR001148 | Alpha carbonic anhydrase domain | Domain |
E [auth X], F [auth C] | IPR036398 | Alpha carbonic anhydrase domain superfamily | Homologous Superfamily |
E [auth X], F [auth C] | IPR023561 | Carbonic anhydrase, alpha-class | Family |