3SOK
Dichelobacter nodosus pilin FimA
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d3soka_ | Alpha and beta proteins (a+b) | Pili subunits | Pili subunits | automated matches | automated matches | (Dichelobacter nodosus ) [TaxId: 870 ], | SCOPe (2.08) |
| B | d3sokb_ | Alpha and beta proteins (a+b) | Pili subunits | Pili subunits | automated matches | automated matches | (Dichelobacter nodosus ) [TaxId: 870 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | PF00114,PF07963 | e3sokA1 | A: a+b two layers | X: Pili subunits (From Topology) | H: Pili subunits (From Topology) | T: Pili subunits | F: PF00114,PF07963 | ECOD (1.6) |
| B | PF00114,PF07963 | e3sokB1 | A: a+b two layers | X: Pili subunits (From Topology) | H: Pili subunits (From Topology) | T: Pili subunits | F: PF00114,PF07963 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.30.700.10 | Alpha Beta | 2-Layer Sandwich | Glycoprotein, Type 4 Pilin | Glycoprotein, Type 4 Pilin | CATH (4.3.0) |
| B | 3.30.700.10 | Alpha Beta | 2-Layer Sandwich | Glycoprotein, Type 4 Pilin | Glycoprotein, Type 4 Pilin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF07963 | Prokaryotic N-terminal methylation motif (N_methyl) | Prokaryotic N-terminal methylation motif | - | Motif | |
| PF00114 | Pilin (bacterial filament) (Pilin) | Pilin (bacterial filament) | Proteins with only the short N-terminal methylation site are not separated from the noise. The Prosite pattern detects those better. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Fimbrial protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR012902 | Prokaryotic N-terminal methylation site | PTM | |
| IPR001082 | Fimbrial protein pilin | Family | |
| IPR045584 | Pilin-like | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Bitopic proteins | Type IV pilin | Bacterial pilin |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |
