7BQD

Solution NMR structure of NF8 (knot fold); de novo designed protein with a novel fold


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Exploration of novel alpha-beta-protein folds through de novo design

Minami, S.Kobayashi, N.Sugiki, T.Nagashima, T.Fujiwara, T.Koga, R.Chikenji, G.Koga, N.

(2023) Nat Struct Mol Biol 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
NF888synthetic constructMutation(s): 0 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Japan Society for the Promotion of Science (JSPS)Japan18K06152
Japan Agency for Medical Research and Development (AMED)JapanJP19am0101072
Japan Society for the Promotion of Science (JSPS)Japan18H05420
Japan Society for the Promotion of Science (JSPS)Japan15H05592
Japan Society for the Promotion of Science (JSPS)Japan19H03166

Revision History  (Full details and data files)

  • Version 1.0: 2021-03-24
    Type: Initial release
  • Version 1.1: 2023-06-14
    Changes: Database references, Other
  • Version 1.2: 2023-07-05
    Changes: Database references
  • Version 1.3: 2024-05-15
    Changes: Data collection, Database references