Chd1 domains communicate across the DNA gyres of the nucleosome
Nodelman, I.M., Jenkins, K.R., Ren, R., Horvath, K.C., Hauk, G., Bowman, G.D.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Chromo domain-containing protein 1 | 271 | Saccharomyces cerevisiae S288C | Mutation(s): 0  Gene Names: CHD1, YER164W, SYGP-ORF4 EC: 3.6.4 | ||
UniProt | |||||
Find proteins for P32657 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P32657  Go to UniProtKB:  P32657 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P32657 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*GP*CP*TP*GP*GP*AP*AP*AP*TP*TP*TP*CP*CP*AP*GP*CP*G)-3') | C [auth W], E [auth Y] | 17 | synthetic construct | ||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*CP*GP*CP*TP*GP*GP*AP*AP*AP*TP*TP*TP*CP*CP*AP*GP*C)-3') | D [auth X], F [auth Z] | 17 | synthetic construct | ||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
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a = 86.076 | α = 90 |
b = 57.099 | β = 103.9 |
c = 99.493 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
XDS | data scaling |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | GM-R01-084192 |