Download MendeleyCrystal Structure of the CW domain of ZCWPW2 mutant F78R in complex with histone H3 peptide
Liu, Y., Tempel, W., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J.To be published.
4Z0R
Crystal Structure of the CW domain of ZCWPW2 mutant F78R in complex with histone H3 peptide
- DOI: 10.2210/pdb4Z0R/pdb
- Classification: PROTEIN BINDING/STRUCTURAL PROTEIN
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2015-03-26 Released: 2015-04-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.192
- R-Value Work: 0.177
- R-Value Observed: 0.178
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Zinc finger CW-type PWWP domain protein 2 | A, B, C | 59 | Homo sapiens | Mutation(s): 1 Gene Names: ZCWPW2 |  |
Find proteins for Q504Y3 (Homo sapiens) Explore Q504Y3 Go to UniProtKB: Q504Y3 | |||||
NIH Common Fund Data Resources | |||||
PHAROS: Q504Y3 GTEx: ENSG00000206559 | |||||
Protein Feature ViewExpand | |||||
| |||||
- Find similar proteins by: Sequence | Structure
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SO4 Query on SO4 | A | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | Ligand Interaction | |
| ZN Query on ZN | A, B, C | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | Ligand Interaction | |
| EDO Query on EDO | B | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | Ligand Interaction | |
| UNX Query on UNX | A, B, C, D | UNKNOWN ATOM OR ION X |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| M3L Query on M3L | D | L-PEPTIDE LINKING | C9 H21 N2 O2 |  | LYS |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.75 Å
- R-Value Free: 0.192
- R-Value Work: 0.177
- R-Value Observed: 0.178
- Space Group: H 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 126.659 | α = 90 |
| b = 126.659 | β = 90 |
| c = 63.271 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| Aimless | data scaling |
| PDB_EXTRACT | data extraction |
| XDS | data scaling |
| Coot | model building |
| PHASER | phasing |
Entry History
Deposition Data
- Deposited Date: 2015-03-26
- Released Date: 2015-04-08 Deposition Author(s): Liu, Y., Tempel, W., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
Revision History (Full details and data files)
- Version 1.0: 2015-04-08
Type: Initial release - Version 1.1: 2017-11-22
Changes: Derived calculations, Refinement description, Source and taxonomy
