4YJW

Crystal structure of a DUF3829 family protein (BVU_3067) from Bacteroides vulgatus ATCC 8482 at 1.80 A resolution

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.80 Å
  • R-Value Free: 0.195 
  • R-Value Work: 0.173 
  • R-Value Observed: 0.174 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history. 


Literature

Crystal structure of a DUF3829 family protein (BVU_3067) from Bacteroides vulgatus ATCC 8482 at 1.80 A resolution

Joint Center for Structural Genomics (JCSG)

To be published.

Macromolecules
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(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
DUF3829 family protein169Phocaeicola vulgatus ATCC 8482Mutation(s): 0 
Gene Names: BVU_3067
UniProt
Find proteins for A6L4U0 (Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154))
Explore A6L4U0 
Go to UniProtKB:  A6L4U0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA6L4U0
Sequence Annotations
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  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 70.766α = 90
b = 70.766β = 90
c = 67.473γ = 90
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
SHELXphasing
SHARPphasing
XDSdata scaling
BUSTER-TNTrefinement
XSCALEdata scaling
SHELXDphasing
BUSTERrefinement

Structure Validation

View Full Validation Report



View more in-depth experimental data
Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2015-03-18
    Type: Initial release
  • Version 1.1: 2017-11-22
    Changes: Derived calculations, Refinement description, Source and taxonomy
  • Version 1.2: 2018-01-24
    Changes: Database references