Download MendeleyCrystal structure of short chain alcohol dehydrogenase (rspB) from E. coli CFT073 (EFI TARGET EFI-506413) complexed with cofactor NADH
Wichelecki, S., Lukk, T., Imker, H.J., Nair, S.K., Gerlt, J.A.To be published.
4ILK
Crystal structure of short chain alcohol dehydrogenase (rspB) from E. coli CFT073 (EFI TARGET EFI-506413) complexed with cofactor NADH
- PDB DOI: https://doi.org/10.2210/pdb4ILK/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Escherichia coli CFT073
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2012-12-31 Released: 2013-01-30
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.218
- R-Value Work: 0.165
- R-Value Observed: 0.168
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Starvation sensing protein rspB | 359 | Escherichia coli CFT073 | Mutation(s): 0 Gene Names: c1970, rspB EC: 1.1.1 |  | |
UniProt | |||||
Find proteins for A0A0H2V9Q5 (Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)) Explore A0A0H2V9Q5 Go to UniProtKB: A0A0H2V9Q5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0H2V9Q5 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAI Query on NAI | C [auth A], F [auth B] | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE C21 H29 N7 O14 P2 BOPGDPNILDQYTO-NNYOXOHSSA-N |  | ||
| ZN Query on ZN | E [auth A], H [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
| MN Query on MN | D [auth A], G [auth B] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.218
- R-Value Work: 0.165
- R-Value Observed: 0.168
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 47.322 | α = 90 |
| b = 97.133 | β = 90 |
| c = 144.101 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| PHASER | phasing |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
Entry History
Deposition Data
- Released Date: 2013-01-30 Deposition Author(s): Lukk, T., Wichelecki, D., Imker, H.J., Gerlt, J.A., Nair, S.K.
Revision History (Full details and data files)
- Version 1.0: 2013-01-30
Type: Initial release - Version 1.1: 2014-11-12
Changes: Structure summary - Version 1.2: 2024-02-28
Changes: Data collection, Database references, Derived calculations
