Download MendeleyImplication of Arg bindings on aromatic surfaces of lysozyme for additives that prevent protein aggregation
Ito, L., Shiraki, K., Matsuura, T., Yamaguchi, H.To be published.
3A34
Effect of Ariginine on lysozyme
- DOI: 10.2210/pdb3A34/pdb
- Classification: HYDROLASE
- Organism(s): Gallus gallus
- Mutation(s): No
- Deposited: 2009-06-09 Released: 2010-06-16
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.65 Å
- R-Value Free: 0.226
- R-Value Work: 0.196
- R-Value Observed: 0.197
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | Structure
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ARG Query on ARG | A | ARGININE C6 H15 N4 O2 ODKSFYDXXFIFQN-BYPYZUCNSA-O |  | Ligand Interaction | |
| ACT Query on ACT | A | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | Ligand Interaction | |
| CL Query on CL | A | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | Ligand Interaction | |
| NA Query on NA | A | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.65 Å
- R-Value Free: 0.226
- R-Value Work: 0.196
- R-Value Observed: 0.197
- Space Group: P 43 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 78.357 | α = 90 |
| b = 78.357 | β = 90 |
| c = 37.312 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
Entry History
Deposition Data
- Deposited Date: 2009-06-09
- Released Date: 2010-06-16 Deposition Author(s): Ito, L., Shiraki, K., Matsuura, T., Yamaguchi, H.
